Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NX823_RS04575 Genome accession   NZ_CP103352
Coordinates   922501..923295 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM117508     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 917501..928295
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX823_RS04545 (NX823_04545) sxzA 918340..919371 (+) 1032 WP_003233568.1 iron chelate uptake ABC transporter family permease subunit -
  NX823_RS04550 (NX823_04550) yfhB 919486..920367 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  NX823_RS04555 (NX823_04555) yfhC 920455..921039 (+) 585 WP_032723010.1 nitroreductase -
  NX823_RS04560 (NX823_04560) yfhD 921078..921269 (-) 192 WP_258996568.1 YfhD family protein -
  NX823_RS04565 (NX823_04565) yfhE 921336..921446 (-) 111 WP_003223230.1 YfhE family protein -
  NX823_RS04570 (NX823_04570) yfhF 921501..922412 (-) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  NX823_RS04575 (NX823_04575) recX 922501..923295 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  NX823_RS04580 (NX823_04580) yfhH 923297..923611 (+) 315 WP_003244592.1 YfhH family protein -
  NX823_RS04585 (NX823_04585) yfhI 923754..924947 (+) 1194 WP_003243500.1 MFS transporter -
  NX823_RS04590 (NX823_04590) sspK 924979..925131 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NX823_RS04595 (NX823_04595) yfhJ 925256..925525 (+) 270 WP_003243789.1 YfhJ family protein -
  NX823_RS04600 (NX823_04600) yfhK 925670..926188 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  NX823_RS04605 (NX823_04605) spdL 926273..926605 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  NX823_RS04610 (NX823_04610) ephM 926592..927452 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=722271 NX823_RS04575 WP_014479217.1 922501..923295(+) (recX) [Bacillus subtilis strain SRCM117508]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=722271 NX823_RS04575 WP_014479217.1 922501..923295(+) (recX) [Bacillus subtilis strain SRCM117508]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992