Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NX819_RS07945 Genome accession   NZ_CP103351
Coordinates   1499371..1499835 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SRCM115947     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1494371..1504835
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX819_RS07925 (NX819_07925) kinA 1494837..1496657 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  NX819_RS07930 (NX819_07930) dapX 1496668..1497849 (-) 1182 WP_003232415.1 aminotransferase A -
  NX819_RS07935 (NX819_07935) - 1498051..1498212 (-) 162 WP_003245246.1 hypothetical protein -
  NX819_RS07940 (NX819_07940) cheV 1498416..1499327 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  NX819_RS07945 (NX819_07945) kre 1499371..1499835 (-) 465 WP_003232406.1 YkyB family protein Regulator
  NX819_RS07950 (NX819_07950) ykuC 1499961..1501253 (-) 1293 WP_046380992.1 MFS transporter -
  NX819_RS07955 (NX819_07955) ltdD 1501329..1501823 (-) 495 WP_072557193.1 L,D-transpeptidase family protein -
  NX819_RS07960 (NX819_07960) ppeE 1501880..1502740 (-) 861 WP_017697271.1 metallophosphoesterase -
  NX819_RS07965 (NX819_07965) fadH 1502883..1503647 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=722208 NX819_RS07945 WP_003232406.1 1499371..1499835(-) (kre) [Bacillus subtilis strain SRCM115947]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=722208 NX819_RS07945 WP_003232406.1 1499371..1499835(-) (kre) [Bacillus subtilis strain SRCM115947]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1