Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NX819_RS06460 Genome accession   NZ_CP103351
Coordinates   1232235..1232426 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM115947     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1227235..1237426
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX819_RS06430 (NX819_06430) argF 1228100..1229059 (+) 960 WP_229762431.1 ornithine carbamoyltransferase -
  NX819_RS06435 (NX819_06435) yjzC 1229145..1229324 (+) 180 WP_003245356.1 YjzC family protein -
  NX819_RS06440 (NX819_06440) yjzD 1229370..1229555 (-) 186 WP_003245236.1 YjzD family protein -
  NX819_RS06445 (NX819_06445) - 1229804..1230538 (+) 735 WP_032721340.1 hypothetical protein -
  NX819_RS06450 (NX819_06450) - 1230620..1231177 (+) 558 WP_229762430.1 hypothetical protein -
  NX819_RS06455 (NX819_06455) med 1231267..1232220 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  NX819_RS06460 (NX819_06460) comZ 1232235..1232426 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  NX819_RS06465 (NX819_06465) yjzB 1232456..1232695 (-) 240 WP_003232972.1 spore coat protein YjzB -
  NX819_RS06470 (NX819_06470) fabH 1232860..1233798 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  NX819_RS06475 (NX819_06475) fabF 1233821..1235062 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  NX819_RS06480 (NX819_06480) yjaZ 1235138..1235923 (+) 786 WP_033883592.1 DUF2268 domain-containing protein -
  NX819_RS06485 (NX819_06485) appD 1236115..1237101 (+) 987 WP_229762429.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=722200 NX819_RS06460 WP_003224559.1 1232235..1232426(+) (comZ) [Bacillus subtilis strain SRCM115947]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=722200 NX819_RS06460 WP_003224559.1 1232235..1232426(+) (comZ) [Bacillus subtilis strain SRCM115947]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1