Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NX819_RS04935 Genome accession   NZ_CP103351
Coordinates   950293..951087 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM115947     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 945293..956087
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX819_RS04905 (NX819_04905) sxzA 946132..947163 (+) 1032 WP_003233568.1 iron chelate uptake ABC transporter family permease subunit -
  NX819_RS04910 (NX819_04910) yfhB 947278..948159 (+) 882 WP_032723009.1 PhzF family phenazine biosynthesis isomerase -
  NX819_RS04915 (NX819_04915) yfhC 948247..948831 (+) 585 WP_032723010.1 nitroreductase -
  NX819_RS04920 (NX819_04920) yfhD 948870..949061 (-) 192 WP_003233561.1 YfhD family protein -
  NX819_RS04925 (NX819_04925) yfhE 949128..949238 (-) 111 WP_003223230.1 YfhE family protein -
  NX819_RS04930 (NX819_04930) yfhF 949293..950204 (-) 912 WP_033883295.1 TIGR01777 family oxidoreductase -
  NX819_RS04935 (NX819_04935) recX 950293..951087 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  NX819_RS04940 (NX819_04940) yfhH 951089..951403 (+) 315 WP_003244592.1 YfhH family protein -
  NX819_RS04945 (NX819_04945) yfhI 951546..952739 (+) 1194 WP_003243500.1 MFS transporter -
  NX819_RS04950 (NX819_04950) sspK 952771..952923 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NX819_RS04955 (NX819_04955) yfhJ 953048..953317 (+) 270 WP_015252516.1 YfhJ family protein -
  NX819_RS04960 (NX819_04960) yfhK 953462..953980 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  NX819_RS04965 (NX819_04965) spdL 954065..954397 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  NX819_RS04970 (NX819_04970) ephM 954384..955244 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=722191 NX819_RS04935 WP_029726844.1 950293..951087(+) (recX) [Bacillus subtilis strain SRCM115947]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=722191 NX819_RS04935 WP_029726844.1 950293..951087(+) (recX) [Bacillus subtilis strain SRCM115947]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996