Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   NX810_RS06190 Genome accession   NZ_CP103350
Coordinates   1199276..1200427 (+) Length   383 a.a.
NCBI ID   WP_046380934.1    Uniprot ID   A0AA96USA1
Organism   Bacillus subtilis strain SRCM117108     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context

Location: 1194276..1205427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX810_RS06155 (NX810_06155) yjbB 1194948..1196165 (+) 1218 WP_010886478.1 MFS transporter -
  NX810_RS06160 (NX810_06160) yjbC 1196330..1196908 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  NX810_RS06165 (NX810_06165) spx 1197089..1197484 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  NX810_RS06170 (NX810_06170) yjbE 1197527..1198183 (-) 657 WP_003232944.1 TerC family protein -
  NX810_RS06175 (NX810_06175) - 1198352..1198492 (+) 141 WP_119122854.1 hypothetical protein -
  NX810_RS06180 (NX810_06180) mecA 1198459..1199115 (+) 657 WP_015383354.1 adaptor protein MecA Regulator
  NX810_RS06185 (NX810_06185) - 1199110..1199232 (-) 123 WP_003245684.1 hypothetical protein -
  NX810_RS06190 (NX810_06190) coiA 1199276..1200427 (+) 1152 WP_046380934.1 competence protein CoiA Machinery gene
  NX810_RS06195 (NX810_06195) pepF 1200657..1202486 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  NX810_RS06200 (NX810_06200) - 1202524..1202691 (-) 168 WP_003244944.1 hypothetical protein -
  NX810_RS06205 (NX810_06205) spxH 1203006..1203905 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  NX810_RS06210 (NX810_06210) bhbI 1203902..1204300 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  NX810_RS06215 (NX810_06215) cwlQ 1204555..1205289 (-) 735 WP_029726274.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence

Protein


Download         Length: 383 a.a.        Molecular weight: 44783.89 Da        Isoelectric Point: 10.0034

>NTDB_id=722123 NX810_RS06190 WP_046380934.1 1199276..1200427(+) (coiA) [Bacillus subtilis strain SRCM117108]
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=722123 NX810_RS06190 WP_046380934.1 1199276..1200427(+) (coiA) [Bacillus subtilis strain SRCM117108]
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(1-373)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963