Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NX810_RS04545 Genome accession   NZ_CP103350
Coordinates   895067..895861 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM117108     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 890067..900861
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX810_RS04515 (NX810_04515) sxzA 890906..891937 (+) 1032 WP_003233568.1 iron chelate uptake ABC transporter family permease subunit -
  NX810_RS04520 (NX810_04520) yfhB 892052..892933 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  NX810_RS04525 (NX810_04525) yfhC 893021..893605 (+) 585 WP_003243940.1 nitroreductase -
  NX810_RS04530 (NX810_04530) yfhD 893644..893835 (-) 192 WP_003233561.1 YfhD family protein -
  NX810_RS04535 (NX810_04535) yfhE 893902..894012 (-) 111 WP_003223230.1 YfhE family protein -
  NX810_RS04540 (NX810_04540) yfhF 894067..894978 (-) 912 WP_029726845.1 TIGR01777 family oxidoreductase -
  NX810_RS04545 (NX810_04545) recX 895067..895861 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  NX810_RS04550 (NX810_04550) yfhH 895863..896183 (+) 321 WP_029726843.1 YfhH family protein -
  NX810_RS04555 (NX810_04555) yfhI 896320..897513 (+) 1194 WP_072692836.1 MFS transporter -
  NX810_RS04560 (NX810_04560) sspK 897545..897697 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NX810_RS04565 (NX810_04565) yfhJ 897822..898091 (+) 270 WP_003243789.1 YfhJ family protein -
  NX810_RS04570 (NX810_04570) yfhK 898236..898754 (+) 519 WP_029726841.1 SH3 domain-containing protein -
  NX810_RS04575 (NX810_04575) spdL 898839..899156 (+) 318 WP_032679045.1 SdpC immunity protein SpdL -
  NX810_RS04580 (NX810_04580) ephM 899158..900018 (+) 861 WP_029726839.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=722110 NX810_RS04545 WP_029726844.1 895067..895861(+) (recX) [Bacillus subtilis strain SRCM117108]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=722110 NX810_RS04545 WP_029726844.1 895067..895861(+) (recX) [Bacillus subtilis strain SRCM117108]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996