Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NX062_RS07680 Genome accession   NZ_CP103328
Coordinates   1466338..1466913 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain KC14-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1461338..1471913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX062_RS07650 (NX062_07650) dapD 1461502..1462212 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NX062_RS07655 (NX062_07655) dapI 1462282..1463406 (+) 1125 WP_043857415.1 N-acetyldiaminopimelate deacetylase -
  NX062_RS07660 (NX062_07660) ykuS 1463468..1463737 (+) 270 WP_306694018.1 YkuS family protein -
  NX062_RS07665 (NX062_07665) mscT 1463774..1464577 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  NX062_RS07670 (NX062_07670) ahpA 1464814..1465356 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  NX062_RS07675 (NX062_07675) ykuV 1465426..1465872 (+) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  NX062_RS07680 (NX062_07680) rok 1466338..1466913 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  NX062_RS07685 (NX062_07685) cse15 1466954..1467919 (-) 966 WP_046160341.1 spore protein Cse15 -
  NX062_RS07690 (NX062_07690) mobA 1468056..1468655 (+) 600 WP_046160342.1 molybdenum cofactor guanylyltransferase -
  NX062_RS07695 (NX062_07695) moeB 1468706..1469725 (+) 1020 WP_046160343.1 molybdopterin-synthase adenylyltransferase MoeB -
  NX062_RS07700 (NX062_07700) glp 1469743..1471035 (+) 1293 WP_046160344.1 gephyrin-like molybdotransferase Glp -
  NX062_RS07705 (NX062_07705) mobB 1470996..1471517 (+) 522 WP_046160345.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=721973 NX062_RS07680 WP_003232378.1 1466338..1466913(+) (rok) [Bacillus subtilis strain KC14-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=721973 NX062_RS07680 WP_003232378.1 1466338..1466913(+) (rok) [Bacillus subtilis strain KC14-1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1