Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NX062_RS07580 Genome accession   NZ_CP103328
Coordinates   1450438..1450902 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain KC14-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1445438..1455902
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX062_RS07560 (NX062_07560) kinA 1445906..1447738 (+) 1833 WP_069964148.1 sporulation histidine kinase KinA -
  NX062_RS07565 (NX062_07565) dapX 1447735..1448916 (-) 1182 WP_082090376.1 aminotransferase A -
  NX062_RS07570 (NX062_07570) - 1449118..1449279 (-) 162 WP_003245246.1 hypothetical protein -
  NX062_RS07575 (NX062_07575) cheV 1449483..1450394 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  NX062_RS07580 (NX062_07580) kre 1450438..1450902 (-) 465 WP_003232406.1 YkyB family protein Regulator
  NX062_RS07585 (NX062_07585) ykuC 1451028..1452320 (-) 1293 WP_046380992.1 MFS transporter -
  NX062_RS07590 (NX062_07590) ltdD 1452396..1452890 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  NX062_RS07595 (NX062_07595) ppeE 1452947..1453807 (-) 861 WP_003232400.1 metallophosphoesterase -
  NX062_RS07600 (NX062_07600) fadH 1453950..1454714 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=721972 NX062_RS07580 WP_003232406.1 1450438..1450902(-) (kre) [Bacillus subtilis strain KC14-1]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=721972 NX062_RS07580 WP_003232406.1 1450438..1450902(-) (kre) [Bacillus subtilis strain KC14-1]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1