Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NX062_RS04580 Genome accession   NZ_CP103328
Coordinates   902781..903575 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain KC14-1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 897781..908575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX062_RS04550 (NX062_04550) sxzA 898620..899651 (+) 1032 WP_029317459.1 iron chelate uptake ABC transporter family permease subunit -
  NX062_RS04555 (NX062_04555) yfhB 899766..900647 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  NX062_RS04560 (NX062_04560) yfhC 900735..901319 (+) 585 WP_046160214.1 nitroreductase -
  NX062_RS04565 (NX062_04565) yfhD 901358..901549 (-) 192 WP_003233561.1 YfhD family protein -
  NX062_RS04570 (NX062_04570) yfhE 901616..901726 (-) 111 WP_003223230.1 YfhE family protein -
  NX062_RS04575 (NX062_04575) yfhF 901781..902692 (-) 912 WP_044052591.1 TIGR01777 family oxidoreductase -
  NX062_RS04580 (NX062_04580) recX 902781..903575 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  NX062_RS04585 (NX062_04585) yfhH 903577..903891 (+) 315 WP_003244592.1 YfhH family protein -
  NX062_RS04590 (NX062_04590) yfhI 904034..905227 (+) 1194 WP_003243500.1 MFS transporter -
  NX062_RS04595 (NX062_04595) sspK 905259..905411 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NX062_RS04600 (NX062_04600) yfhJ 905536..905805 (+) 270 WP_015252516.1 YfhJ family protein -
  NX062_RS04605 (NX062_04605) yfhK 905950..906468 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  NX062_RS04610 (NX062_04610) spdL 906553..906885 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  NX062_RS04615 (NX062_04615) ephM 906872..907732 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=721955 NX062_RS04580 WP_003243354.1 902781..903575(+) (recX) [Bacillus subtilis strain KC14-1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=721955 NX062_RS04580 WP_003243354.1 902781..903575(+) (recX) [Bacillus subtilis strain KC14-1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1