Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NWE71_RS25165 Genome accession   NZ_CP103291
Coordinates   5128211..5129161 (-) Length   316 a.a.
NCBI ID   WP_053536781.1    Uniprot ID   A0A9X1IUS9
Organism   Peribacillus frigoritolerans strain NS1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5123211..5134161
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NWE71_RS25145 - 5124683..5124838 (-) 156 WP_258832375.1 hypothetical protein -
  NWE71_RS25150 - 5125363..5126310 (-) 948 WP_309520666.1 siderophore ABC transporter substrate-binding protein -
  NWE71_RS25155 - 5126519..5127277 (-) 759 WP_034310071.1 ABC transporter ATP-binding protein -
  NWE71_RS25160 - 5127271..5128218 (-) 948 WP_053536780.1 iron chelate uptake ABC transporter family permease subunit -
  NWE71_RS25165 ceuB 5128211..5129161 (-) 951 WP_053536781.1 ABC transporter permease Machinery gene
  NWE71_RS25170 - 5129427..5129768 (+) 342 WP_225991161.1 DUF1450 domain-containing protein -
  NWE71_RS25175 - 5130262..5130825 (-) 564 WP_258832376.1 HD-GYP domain-containing protein -
  NWE71_RS25180 - 5132235..5132924 (+) 690 WP_258832377.1 WxL domain-containing protein -
  NWE71_RS25185 - 5132953..5133648 (+) 696 WP_258832378.1 WxL domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34941.26 Da        Isoelectric Point: 9.6490

>NTDB_id=721745 NWE71_RS25165 WP_053536781.1 5128211..5129161(-) (ceuB) [Peribacillus frigoritolerans strain NS1]
MKIRYLVMALIVLSFTSLFIGVKDITPLDLLNLSDDKVQIMLQSRFPRMVTIVIAGIVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYLSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKFIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRILIYPFEIPIGLVVGVIGSAVFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=721745 NWE71_RS25165 WP_053536781.1 5128211..5129161(-) (ceuB) [Peribacillus frigoritolerans strain NS1]
ATGAAGATAAGATATTTAGTCATGGCGTTAATTGTTTTATCATTTACGTCATTATTCATTGGTGTAAAAGATATTACCCC
CTTGGATTTACTGAATCTAAGTGATGATAAAGTGCAAATCATGCTGCAAAGCCGTTTCCCTAGAATGGTGACCATAGTCA
TTGCCGGTATTGTGATGAGTATAAGCGGTCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTATCCCCGACGACTGCT
GGTACCATGGACTCTGCAAGGCTGGGACTTCTTCTTGCCATTATCATTTTTCCATCTGCAGCACTTATTGAGAAAATGGC
ATTTGCTTTCATATTCGCTTTGGCAGGTACATTCTTGTTCATGAAAATTCTTGATCAAGTGAAATATAAGGATACGATCT
TCATTCCATTGGTTGGTTTGATGTTTGGTAATATCGTAGGATCGATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACATGGATGAATGGTGATTTCTCGATGATCATGTCGGGAAGGTACGAACTTATATATCTAAGTATCCC
GCTAGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCAGGGATGGGTGAGGAGTTTGCTATCAATCTAGGAC
TCAATTATAAGTTTATAGTCAATTTTGGATTGATCATCGTGGCATTATCCTCCACTGTCGTTTTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCAAATATTGTATCCCTTTACCTTGGTGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTGCTAGGGGCAGTCTTCCTATTGATCTGCGATATTCTGGGCAGGATCCTCATATATCCATTTGAAATCCCGATCG
GACTCGTGGTTGGTGTGATAGGAAGCGCCGTATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.316

100

0.503