Detailed information NTG0721725

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: NWE71_RS15005
• Genome accession: NZ_CP103291
• Coordinates: 3138764..3139402 (-)
• Length: 212 a.a.
• NCBI ID: WP_258831245.1
• Uniprot ID: -
• Organism: Peribacillus frigoritolerans strain NS1
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	3132573..3153815	3138764..3139402	within	0

Gene organization within MGE regions

Location: 3132573..3153815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NWE71_RS14985	ilvE	3132573..3133487 (+)	915	WP_258831241.1	branched-chain-amino-acid transaminase	-
NWE71_RS14990	-	3133487..3135424 (+)	1938	WP_258831242.1	putative PEP-binding protein	-
NWE71_RS14995	-	3135488..3137011 (+)	1524	WP_258831243.1	L-lactate permease	-
NWE71_RS15000	-	3137271..3137891 (-)	621	WP_258831244.1	recombinase family protein	-
NWE71_RS15005	endA	3138764..3139402 (-)	639	WP_258831245.1	endonuclease I family protein	Machinery gene
NWE71_RS15010	-	3139573..3140535 (-)	963	WP_258831246.1	S8 family peptidase	-
NWE71_RS15015	-	3140908..3141453 (-)	546	WP_258831247.1	alkaline phosphatase family protein	-
NWE71_RS15020	-	3141754..3142269 (+)	516	WP_258831248.1	undecaprenyl-diphosphatase	-
NWE71_RS15025	-	3142411..3142647 (-)	237	WP_258834030.1	hypothetical protein	-
NWE71_RS15030	-	3143402..3145036 (+)	1635	WP_258831249.1	Na/Pi cotransporter family protein	-
NWE71_RS15035	-	3146113..3147378 (-)	1266	WP_258834031.1	nucleobase:cation symporter-2 family protein	-
NWE71_RS15040	-	3147588..3147929 (-)	342	WP_258831250.1	Na-translocating system protein MpsC family protein	-
NWE71_RS15045	-	3149244..3150540 (-)	1297	Protein_2921	IS110 family transposase	-
NWE71_RS15050	-	3150896..3151897 (-)	1002	WP_258831251.1	LLM class flavin-dependent oxidoreductase	-
NWE71_RS15055	-	3152368..3152784 (+)	417	WP_258831252.1	MarR family winged helix-turn-helix transcriptional regulator	-
NWE71_RS15060	-	3153588..3153815 (-)	228	WP_054400359.1	hypothetical protein	-

Sequence

Protein

• Length: 212 a.a.
• Molecular weight: 24642.06 Da
• Isoelectric Point: 6.5688

>NTDB_id=721725 NWE71_RS15005 WP_258831245.1 3138764..3139402(-) (endA) [Peribacillus frigoritolerans strain NS1]
MLEKTHTDQLNYSPHRYVYPWVDLQENGSLKSLYSGKGMNPLSVIEEDVRLHEMQAKGLIGIFSEYLLNCEHVVPQSWFE
KKEPMRGDLHHLFACEPTCNSSRSNHPYYDFHDYVPEGQILGIKGGCGKAEESKFEPEYGKGIVARATLYFLIRYPKTIK
KELENVSLLLEWHQTFPVSIYEKHRNLAIHELQGNRNPFIDFPESIVTIEKK

Nucleotide

• Length: 639 bp

>NTDB_id=721725 NWE71_RS15005 WP_258831245.1 3138764..3139402(-) (endA) [Peribacillus frigoritolerans strain NS1]
TTGCTTGAAAAAACACATACAGATCAGTTAAACTACAGCCCACATCGTTATGTGTACCCTTGGGTTGATTTGCAGGAAAA
CGGTTCATTAAAAAGCCTTTATTCTGGAAAAGGGATGAATCCACTTTCTGTCATAGAGGAGGACGTTCGGCTCCATGAAA
TGCAGGCAAAAGGGTTAATCGGCATCTTCTCAGAATATCTATTAAACTGTGAGCATGTAGTTCCTCAATCATGGTTCGAA
AAAAAAGAACCGATGAGAGGAGACTTGCATCATCTATTTGCCTGCGAACCCACCTGCAATAGTAGTCGCAGCAATCATCC
TTACTATGATTTTCACGATTATGTCCCTGAAGGACAGATTCTAGGAATCAAAGGTGGCTGCGGCAAGGCTGAAGAAAGTA
AATTCGAACCAGAATATGGCAAAGGAATCGTTGCCAGAGCAACACTCTATTTCCTAATTCGCTATCCAAAAACAATAAAG
AAAGAACTAGAGAATGTCTCTTTATTGCTAGAATGGCATCAAACATTTCCGGTATCCATCTATGAAAAACATCGCAACCT
AGCCATCCATGAACTTCAAGGCAATCGGAACCCATTTATTGATTTTCCAGAGAGTATTGTGACCATAGAAAAGAAGTGA

Domains

Predicted by InterproScan.

• Endonuclease I (Endonuclease_1) (17-204)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	50	100	0.5