Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NWE71_RS04000 Genome accession   NZ_CP103291
Coordinates   837989..838786 (+) Length   265 a.a.
NCBI ID   WP_095392954.1    Uniprot ID   -
Organism   Peribacillus frigoritolerans strain NS1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 832989..843786
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NWE71_RS03975 - 833273..834424 (+) 1152 WP_258832919.1 thiolase family protein -
  NWE71_RS03980 - 834556..836136 (+) 1581 WP_258832920.1 fatty acid--CoA ligase -
  NWE71_RS03985 - 836476..836658 (-) 183 WP_034306455.1 YfhD family protein -
  NWE71_RS03990 - 836767..836889 (-) 123 WP_081088510.1 YfhE family protein -
  NWE71_RS03995 - 836942..837862 (-) 921 WP_258833936.1 TIGR01777 family oxidoreductase -
  NWE71_RS04000 recX 837989..838786 (+) 798 WP_095392954.1 recombination regulator RecX Regulator
  NWE71_RS04005 - 838863..839174 (+) 312 WP_034305394.1 YfhH family protein -
  NWE71_RS04010 - 839228..839383 (-) 156 WP_034305387.1 small, acid-soluble spore protein K -
  NWE71_RS04015 - 839497..839763 (+) 267 WP_095392957.1 YfhJ family protein -
  NWE71_RS04020 - 839813..840790 (-) 978 WP_095392960.1 metal-dependent hydrolase -
  NWE71_RS04025 mutY 840999..842117 (+) 1119 WP_258832921.1 A/G-specific adenine glycosylase -
  NWE71_RS04030 - 842333..842557 (-) 225 WP_034305377.1 hypothetical protein -
  NWE71_RS04035 fabL 842625..843374 (+) 750 WP_048685448.1 enoyl-[acyl-carrier-protein] reductase FabL -
  NWE71_RS04040 - 843456..843752 (+) 297 WP_258832922.1 gamma-type small acid-soluble spore protein -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 31437.90 Da        Isoelectric Point: 6.7088

>NTDB_id=721710 NWE71_RS04000 WP_095392954.1 837989..838786(+) (recX) [Peribacillus frigoritolerans strain NS1]
MPNITKITTQKKRTDRYNIFVDEKYAFSVDEEVLLKFQLKKGMELDDLLLAEIQFHDEIQKAFTDALNYLSYRMRSESEI
RLYLKKKETEEPIIKEAIHKLYSFNYLDDLEFSKAYVRTHVNGGNKGPTTLKLELKEKGVQDKLIVEALKEYPYDIQIEH
ARNLAGKAVKKEKNISERALRLKVEQTLLRKGFPRDVIHEALEDVTVEKDEDEQWDSLCHHAEKMQRRYKNHEGFEYEQK
MKQALYRKGFPIELIERYLSNPDGD

Nucleotide


Download         Length: 798 bp        

>NTDB_id=721710 NWE71_RS04000 WP_095392954.1 837989..838786(+) (recX) [Peribacillus frigoritolerans strain NS1]
ATGCCAAACATAACAAAAATAACAACCCAAAAGAAACGTACAGATCGTTATAACATCTTCGTCGACGAAAAATATGCCTT
CAGTGTAGACGAAGAAGTGCTATTGAAATTTCAGTTGAAAAAGGGTATGGAGCTTGATGACCTGCTTTTGGCCGAAATAC
AATTCCATGATGAAATCCAAAAAGCATTTACCGATGCACTTAATTATTTATCATACCGGATGCGCTCGGAATCGGAAATT
CGCCTTTATTTAAAAAAGAAGGAAACGGAAGAGCCGATCATTAAGGAAGCGATACATAAACTATACAGTTTTAACTATTT
AGACGACCTTGAATTTTCCAAGGCTTACGTACGGACCCATGTGAATGGAGGGAATAAAGGGCCCACTACCCTTAAGCTTG
AGCTTAAGGAAAAAGGGGTGCAAGATAAGTTGATTGTCGAGGCATTGAAGGAATACCCTTATGATATTCAAATTGAACAT
GCAAGGAATCTGGCTGGAAAAGCGGTCAAAAAGGAAAAAAACATTTCCGAACGAGCTTTAAGGCTGAAGGTTGAACAAAC
CTTGTTACGGAAAGGTTTCCCTAGAGATGTCATCCATGAAGCACTTGAAGATGTGACAGTTGAAAAGGATGAGGATGAAC
AATGGGATTCCCTTTGCCACCATGCCGAAAAAATGCAACGCCGATATAAAAACCATGAAGGCTTCGAATATGAACAAAAA
ATGAAGCAGGCATTATACCGAAAAGGTTTTCCAATAGAATTGATTGAGCGTTATCTTTCCAATCCTGATGGGGATTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

49.807

97.736

0.487