Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NXY85_RS02640 Genome accession   NZ_CP103290
Coordinates   489126..489701 (+) Length   191 a.a.
NCBI ID   WP_258729134.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain NS2     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 484126..494701
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NXY85_RS02610 dapD 484246..484956 (+) 711 WP_003327258.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NXY85_RS02615 - 485029..486153 (+) 1125 WP_258729133.1 N-acetyldiaminopimelate deacetylase -
  NXY85_RS02620 - 486214..486459 (+) 246 WP_003327256.1 YkuS family protein -
  NXY85_RS02625 - 486498..487301 (-) 804 WP_003327255.1 mechanosensitive ion channel family protein -
  NXY85_RS02630 ahpA 487551..488093 (+) 543 WP_003327254.1 biofilm-specific peroxidase AhpA -
  NXY85_RS02635 - 488179..488637 (+) 459 WP_003327253.1 TlpA disulfide reductase family protein -
  NXY85_RS02640 rok 489126..489701 (+) 576 WP_258729134.1 transcriptional regulator Rok Regulator
  NXY85_RS02645 - 489747..490706 (-) 960 WP_258729135.1 sporulation protein -
  NXY85_RS02650 - 490850..491434 (+) 585 WP_258729136.1 molybdenum cofactor guanylyltransferase -
  NXY85_RS02655 - 491506..492525 (+) 1020 WP_010788468.1 MoeB/ThiF family adenylyltransferase -
  NXY85_RS02660 glp 492545..493837 (+) 1293 WP_258729137.1 gephyrin-like molybdotransferase Glp -
  NXY85_RS02665 mobB 493798..494322 (+) 525 WP_258729138.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21701.60 Da        Isoelectric Point: 9.8783

>NTDB_id=721645 NXY85_RS02640 WP_258729134.1 489126..489701(+) (rok) [Bacillus atrophaeus strain NS2]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSSAAETKKDFRPERKSESLPVLAELAAQEIRSYQPQ
QASQPQPQSTSSIPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQSL
IKMYPEVKKPYRGQYILEGEIASDSAENVTE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=721645 NXY85_RS02640 WP_258729134.1 489126..489701(+) (rok) [Bacillus atrophaeus strain NS2]
ATGTTTAATGAGAGGGAAGCTTTACGCTTGCGTTTGGAACAGTTAAATGAGGCTGAGGTTAAAGTCATCCGTGAATATCA
AATAGAGCGTGACAAAATATATGCAAAACTAAGAGAGCTTGACCGCAATGGAAGCTCAGCAGCGGAAACAAAAAAAGATT
TTCGCCCTGAAAGAAAAAGTGAGTCTCTTCCTGTGCTAGCCGAGCTTGCAGCACAAGAGATCAGAAGCTATCAGCCGCAG
CAGGCATCACAGCCGCAGCCGCAATCCACCTCTTCTATTCCGGCGGGTATTCCGGACGGAACGACAAGAAGAAGAAGAGG
AACGGCAAGACCGGGTTCAAAGGCAGCAAAGCTTCGTGAAGCGGCAATCAAAACATTAAAACGCCATAACGCAGCGATCA
AAAGCTCCGAACTTCAAAAGGAAATTGAGAAGGAAAGCGGGCTTGAAATCCCTAATATGACAACGTTTATGCAAAGTTTA
ATTAAAATGTATCCGGAAGTGAAAAAGCCGTATCGCGGCCAGTACATTTTAGAAGGCGAAATCGCTTCAGACTCTGCAGA
AAATGTGACTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

100

0.874