Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   PVK49_RS03470 Genome accession   NZ_CP118306
Coordinates   668553..668735 (+) Length   60 a.a.
NCBI ID   WP_011184726.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 20154608     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 663553..673735
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PVK49_RS03440 (PVK49_03435) - 664291..664719 (+) 429 WP_011184732.1 DUF1617 family protein -
  PVK49_RS03445 (PVK49_03440) - 664722..665333 (+) 612 WP_011184731.1 DUF1366 domain-containing protein -
  PVK49_RS03450 (PVK49_03445) - 665343..665798 (+) 456 WP_011184730.1 phage holin family protein -
  PVK49_RS03455 (PVK49_03450) - 665916..666668 (+) 753 WP_030126404.1 CHAP domain-containing protein -
  PVK49_RS03460 (PVK49_03455) speC 666737..667444 (-) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  PVK49_RS03465 (PVK49_03460) mf2 667555..668313 (-) 759 WP_011184727.1 DNase Mf2 -
  PVK49_RS03470 (PVK49_03465) prx 668553..668735 (+) 183 WP_011184726.1 hypothetical protein Regulator
  PVK49_RS03475 (PVK49_03470) - 669267..671129 (+) 1863 WP_047235759.1 heavy metal translocating P-type ATPase -
  PVK49_RS03480 (PVK49_03475) - 671429..672364 (-) 936 WP_047235760.1 dihydroorotate oxidase -
  PVK49_RS03485 (PVK49_03480) - 672603..673298 (+) 696 WP_002983928.1 phosphoglycerate mutase -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6936.91 Da        Isoelectric Point: 4.1954

>NTDB_id=721639 PVK49_RS03470 WP_011184726.1 668553..668735(+) (prx) [Streptococcus pyogenes strain 20154608]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPNEKIKNGEIVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=721639 PVK49_RS03470 WP_011184726.1 668553..668735(+) (prx) [Streptococcus pyogenes strain 20154608]
ATGCTAACATACGACGAATTTAAACAAGCAATTGACAATGGATATATCACAGCAGACACAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAAGAATGGAGAAATTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

98.333

100

0.983

  prx Streptococcus pyogenes MGAS8232

86.667

100

0.867

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6

  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583

  prx Streptococcus pyogenes MGAS315

71.429

70

0.5