Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   PUW21_RS21880 Genome accession   NZ_CP118167
Coordinates   4186362..4187156 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain 21855     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4181362..4192156
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW21_RS21855 (PUW21_21855) - 4182476..4183159 (-) 684 WP_024573086.1 response regulator transcription factor -
  PUW21_RS21860 (PUW21_21860) - 4183371..4184270 (+) 900 WP_042976941.1 PepSY domain-containing protein -
  PUW21_RS21865 (PUW21_21865) - 4184431..4184931 (+) 501 WP_110109549.1 PepSY domain-containing protein -
  PUW21_RS21870 (PUW21_21870) - 4184928..4185057 (-) 130 Protein_4256 hypothetical protein -
  PUW21_RS21875 (PUW21_21875) htrA 4185078..4186280 (-) 1203 WP_015250812.1 serine protease HtrC Regulator
  PUW21_RS21880 (PUW21_21880) vicX 4186362..4187156 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  PUW21_RS21885 (PUW21_21885) walI 4187178..4188020 (-) 843 WP_029318542.1 WalRK two-component regulatory system regulator WalI -
  PUW21_RS21890 (PUW21_21890) walH 4188007..4189374 (-) 1368 WP_046664054.1 WalRK two-component regulatory system regulator WalH -
  PUW21_RS21895 (PUW21_21895) walK 4189364..4191199 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  PUW21_RS21900 (PUW21_21900) walR 4191207..4191914 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=721590 PUW21_RS21880 WP_003226939.1 4186362..4187156(-) (vicX) [Bacillus subtilis strain 21855]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=721590 PUW21_RS21880 WP_003226939.1 4186362..4187156(-) (vicX) [Bacillus subtilis strain 21855]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AACGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTAAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGTGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTACAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53