Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   PUW21_RS16530 Genome accession   NZ_CP118167
Coordinates   3145639..3146334 (-) Length   231 a.a.
NCBI ID   WP_004399109.1    Uniprot ID   O34951
Organism   Bacillus subtilis strain 21855     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3140639..3151334
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW21_RS16510 (PUW21_16510) yttA 3141066..3141812 (+) 747 WP_003229141.1 LMBR1 domain-containing protein -
  PUW21_RS16515 (PUW21_16515) bceB 3141849..3143789 (-) 1941 WP_003229139.1 bacitracin ABC transporter permease BceB -
  PUW21_RS16520 (PUW21_16520) bceA 3143779..3144540 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  PUW21_RS16525 (PUW21_16525) bceS 3144642..3145646 (-) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  PUW21_RS16530 (PUW21_16530) braR 3145639..3146334 (-) 696 WP_004399109.1 two-component response regulator BceR Regulator
  PUW21_RS16535 (PUW21_16535) ytrF 3146431..3147741 (-) 1311 WP_004398682.1 ABC transporter permease YtrF -
  PUW21_RS16540 (PUW21_16540) ytrE 3147731..3148426 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  PUW21_RS16545 (PUW21_16545) ytrD 3148441..3149418 (-) 978 WP_004398887.1 ABC transporter permease YtrD -
  PUW21_RS16550 (PUW21_16550) ytrC 3149448..3150434 (-) 987 WP_003246175.1 ABC transporter permease YtrC -
  PUW21_RS16555 (PUW21_16555) ytrB 3150428..3151306 (-) 879 WP_004398506.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26866.74 Da        Isoelectric Point: 5.3731

>NTDB_id=721562 PUW21_RS16530 WP_004399109.1 3145639..3146334(-) (braR) [Bacillus subtilis strain 21855]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=721562 PUW21_RS16530 WP_004399109.1 3145639..3146334(-) (braR) [Bacillus subtilis strain 21855]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGTCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34951

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377