Detailed information NTG0721394

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: PUV55_RS03030
• Genome accession: NZ_CP118165
• Coordinates: 592404..595232 (+)
• Length: 942 a.a.
• NCBI ID: WP_261491223.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain XP11
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 587404..600232

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUV55_RS03000 (PUV55_03000)	-	587906..588184 (+)	279	WP_005712614.1	type II toxin-antitoxin system RelE/ParE family toxin	-
PUV55_RS03005 (PUV55_03005)	-	588195..588467 (+)	273	WP_005712616.1	HigA family addiction module antitoxin	-
PUV55_RS03010 (PUV55_03010)	rhlB	588531..589751 (+)	1221	WP_005712618.1	ATP-dependent RNA helicase RhlB	-
PUV55_RS03015 (PUV55_03015)	-	589818..590069 (+)	252	Protein_596	helicase HerA-like domain-containing protein	-
PUV55_RS03020 (PUV55_03020)	-	590141..591355 (-)	1215	WP_021114868.1	ATP-binding protein	-
PUV55_RS03025 (PUV55_03025)	ssb	591562..592101 (-)	540	WP_005714441.1	single-stranded DNA-binding protein	Machinery gene
PUV55_RS03030 (PUV55_03030)	uvrA	592404..595232 (+)	2829	WP_261491223.1	excinuclease ABC subunit UvrA	Machinery gene
PUV55_RS03035 (PUV55_03035)	-	595316..595696 (+)	381	WP_010786782.1	YacL family protein	-
PUV55_RS03040 (PUV55_03040)	-	595662..595913 (+)	252	WP_016527969.1	transcriptional regulator	-
PUV55_RS03045 (PUV55_03045)	-	596024..600190 (-)	4167	WP_274360085.1	YadA-like family protein	-

Sequence

Protein

• Length: 942 a.a.
• Molecular weight: 104493.03 Da
• Isoelectric Point: 6.6453

>NTDB_id=721394 PUV55_RS03030 WP_261491223.1 592404..595232(+) (uvrA) [Glaesserella parasuis strain XP11]
MQHIDIRGARTHNLKNVNLVLPRDKFIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRCPDHDVPLAAQTISQMVDRVLEEPEGKRLMLLSPVVKDRKG
EHAKLLENLTANGYIRARIDGEICDLSDPPKLELQKKHTIEVVIDRFKVRSDIATRLAESFETALELSGSTAIIADMDDP
NAEELVFSSSFACSHCGYSLTELEPRLFSFNNPAGACPTCDGLGVQQYFDERKVVQNPDVSLASGAIKGWDRRSFYYFGL
LKSVAKHYDFDIEMPFNQLPKKIQNIILNGSKDEIEFVYVNDRGDSVKRVHTFEGVLNNMARRYKETESNAVREELAKYI
NNRVCTDCEGSRLRREARYVFLEKTNLPMVSEKSIGEALEFFEGLHLSGQKAQIAEKILKEIRERLSFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAIMVADHIVDIG
PGAGVHGGQIIAQGTAQEIMQNEASITGKFLSGKEKIEIPKQRTPRDESKQLVLKGASGNNLKEVDLAIPVGLFTCITGV
SGSGKSTLINDTLFPIAQNALNRAENSDVAPYKSIDGLAYFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA
RARGYTVGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYKGKTIHQVLDMTVEEAREFFD
AVPMIARKLQTLIDVGLSYIRLGQSSTTLSGGEAQRVKLAAELSKRDTGKTLYILDEPTTGLHFADIKQLLTVLHRLRDQ
GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIAEGTPEEVAKDKKSHTARFLKEILKKG

Nucleotide

• Length: 2829 bp

>NTDB_id=721394 PUV55_RS03030 WP_261491223.1 592404..595232(+) (uvrA) [Glaesserella parasuis strain XP11]
ATGCAACATATTGATATTCGTGGGGCGAGAACCCACAATTTAAAAAACGTGAATTTGGTTCTTCCGAGAGATAAATTTAT
TGTGATTACAGGGTTGTCAGGGTCAGGCAAATCGTCTTTGGCTTTTGATACTCTTTATGCTGAAGGGCAACGTCGTTATG
TGGAAAGTTTATCCGCTTATGCTCGTCAGTTCTTGTCTTTAATGGAAAAGCCTGATGTCGATCACATTGAAGGGCTTTCC
CCTGCGATTTCAATTGAGCAGAAATCTACCTCACACAATCCTCGTTCTACGGTAGGGACGGTGACGGAAATCCACGATTA
TTTGCGTTTGTTGTTTGCCCGTGTGGGCGAGCCTCGCTGTCCTGATCACGATGTGCCGTTAGCGGCTCAGACAATTTCGC
AAATGGTGGATAGAGTTCTGGAAGAGCCTGAAGGTAAGCGTTTGATGTTGCTTTCTCCTGTGGTGAAAGATCGTAAAGGT
GAACACGCAAAATTATTAGAAAATCTGACCGCTAATGGTTATATCCGTGCCAGAATTGATGGGGAAATTTGTGATCTGTC
CGATCCGCCCAAATTAGAGTTGCAGAAAAAACATACGATTGAAGTGGTGATTGATCGTTTTAAAGTGCGTAGCGATATTG
CGACCCGTTTAGCGGAGTCCTTTGAAACGGCATTAGAACTCTCCGGCTCAACGGCGATTATTGCCGATATGGACGATCCA
AATGCGGAAGAGTTAGTGTTTTCGTCAAGTTTTGCTTGCTCTCATTGTGGCTATTCGCTGACGGAACTAGAACCACGTCT
TTTCTCGTTTAATAATCCGGCCGGAGCTTGCCCAACTTGTGATGGTTTGGGAGTTCAGCAATATTTTGATGAACGTAAAG
TGGTGCAAAACCCTGATGTGTCTTTAGCAAGCGGTGCGATTAAGGGTTGGGATCGCCGTAGTTTCTACTATTTCGGTTTG
TTGAAATCGGTGGCGAAACATTATGATTTTGATATTGAAATGCCGTTTAATCAGTTACCGAAGAAAATTCAAAACATCAT
TTTAAATGGTTCAAAAGATGAAATTGAATTTGTCTATGTGAATGATCGGGGTGATAGCGTTAAGCGAGTTCACACTTTTG
AAGGGGTGCTGAATAATATGGCTCGTCGGTATAAGGAAACCGAGTCAAATGCAGTGCGTGAAGAGCTGGCTAAATATATT
AATAATCGTGTTTGTACCGATTGTGAAGGCTCTCGTTTACGTCGTGAAGCCCGTTATGTCTTTTTAGAGAAAACCAACTT
GCCGATGGTGTCGGAAAAAAGTATCGGCGAAGCCTTAGAATTTTTTGAAGGCTTACATCTATCTGGGCAGAAAGCACAAA
TTGCGGAAAAAATTCTCAAAGAGATCCGTGAGCGTTTGTCTTTCCTTGTCAATGTTGGGTTGAACTACCTTTCGCTCTCT
CGTTCGGCAGAAACCTTATCAGGCGGTGAAGCCCAACGTATTCGCCTTGCCAGCCAAATCGGTGCTGGGTTAGTGGGGGT
GATGTATGTGCTTGATGAACCGTCTATTGGCTTGCATCAGCGAGATAACGAACGTTTATTGAACACTCTTATTCATCTTC
GGAATTTGGGTAATACCGTGATTGTGGTTGAACACGATGAAGATGCGATTATGGTGGCAGATCATATTGTCGATATTGGA
CCAGGGGCAGGGGTACACGGTGGGCAGATTATTGCTCAGGGTACGGCTCAAGAAATTATGCAAAATGAAGCATCAATTAC
GGGCAAATTCTTATCGGGTAAGGAAAAAATCGAGATCCCGAAACAGCGTACCCCACGAGATGAAAGCAAACAGCTGGTGT
TAAAAGGGGCGAGCGGTAATAACTTGAAAGAAGTCGATTTAGCCATTCCTGTCGGTCTGTTTACTTGTATTACGGGGGTA
TCGGGTTCGGGCAAATCCACCTTAATTAACGATACCTTATTCCCGATTGCTCAAAATGCGTTAAACCGTGCAGAAAACAG
CGATGTCGCCCCTTATAAGAGCATTGACGGATTGGCTTATTTCGACAAAGTGATCGACATCAATCAAAGCCCGATTGGAC
GTACGCCACGTTCAAACCCTGCGACTTATACAGGTTTATTTACCCCGATTCGTGAACTCTTTGCTGGTACACAAGAAGCA
AGAGCAAGGGGCTATACTGTCGGACGTTTCAGCTTTAACGTTCGTGGCGGACGTTGTGAAGCCTGCCAAGGTGACGGGGT
GATCAAAGTTGAAATGCACTTCTTACCTGATGTATATGTGCCGTGCGACCACTGTAAAGGCAAACGCTATAACCGTGAAA
CCCTTGAAATTCGCTATAAAGGCAAAACCATTCATCAAGTGTTAGATATGACTGTGGAAGAAGCTCGTGAGTTTTTTGAT
GCCGTGCCTATGATTGCACGTAAGCTACAAACTTTAATAGACGTAGGCTTATCCTATATCCGTTTAGGGCAATCTTCTAC
CACCCTGTCAGGTGGCGAAGCTCAGCGGGTGAAACTGGCAGCGGAATTATCCAAACGTGACACGGGCAAAACCCTCTATA
TTCTTGATGAACCAACGACAGGATTACACTTCGCCGACATTAAACAATTATTGACCGTATTGCACCGCTTGCGTGATCAA
GGAAATACCATTGTGGTGATCGAGCATAACTTAGATGTGATCAAAACGGCAGACTGGATTGTCGATCTAGGTCCTGAAGG
CGGTAGCGGTGGCGGACAGATTATCGCCGAAGGTACGCCTGAAGAGGTGGCAAAAGATAAGAAATCTCATACGGCAAGAT
TTTTAAAAGAGATTTTGAAGAAAGGTTAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	56.869	99.682	0.567
uvrA	Streptococcus pneumoniae TIGR4	56.869	99.682	0.567
uvrA	Streptococcus pneumoniae D39	56.869	99.682	0.567