Detailed information NTG0072134

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ST1232TP_RS03695
• Genome accession: NZ_AP024311
• Coordinates: 789696..790778 (+)
• Length: 360 a.a.
• NCBI ID: WP_014532468.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain THI2018-120
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 784696..795778

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ST1232TP_RS03675 (THI2018120TP_06960)	-	785074..786144 (-)	1071	WP_000460983.1	GGDEF domain-containing protein	-
ST1232TP_RS03680 (THI2018120TP_06970)	-	786462..787517 (+)	1056	WP_000258150.1	glycosyltransferase family 4 protein	-
ST1232TP_RS03685 (THI2018120TP_06980)	-	787681..788322 (-)	642	WP_000192949.1	YigZ family protein	-
ST1232TP_RS03690 (THI2018120TP_06990)	fakB1	788466..789332 (+)	867	WP_000686345.1	fatty acid kinase binding subunit FakB1	-
ST1232TP_RS03695 (THI2018120TP_07000)	comFA	789696..790778 (+)	1083	WP_014532468.1	DEAD/DEAH box helicase	Machinery gene
ST1232TP_RS03700 (THI2018120TP_07010)	-	790771..791445 (+)	675	WP_001057962.1	ComF family protein	-
ST1232TP_RS03705 (THI2018120TP_07020)	hpf	791506..792078 (+)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
ST1232TP_RS03710 (THI2018120TP_07030)	secA	792492..795023 (+)	2532	WP_000506529.1	preprotein translocase subunit SecA	-
ST1232TP_RS03715	-	795065..795184 (+)	120	WP_031774844.1	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42024.50 Da
• Isoelectric Point: 9.6802

>NTDB_id=72134 ST1232TP_RS03695 WP_014532468.1 789696..790778(+) (comFA) [Staphylococcus aureus strain THI2018-120]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
IEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGQFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQKMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=72134 ST1232TP_RS03695 WP_014532468.1 789696..790778(+) (comFA) [Staphylococcus aureus strain THI2018-120]
ATGGATAATGTAACAAGATATAAAATAACAGAAAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAACAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCAGTAA
CAGGAGCAGGTAAGACAGAAATGATGTTCCAAGGCATTCAATATGCAAGACGACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGTCAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAA
ATTGAACATGCAACGATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGCTATTTCAAACTTAATAATAATAAGATTCAGA
AAATGTTATATCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATATGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACAATTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TAGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGTGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAA
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	39.233	94.167	0.369