Detailed information    

insolico Bioinformatically predicted

Overview


Name   xerS   Type   Machinery gene
Locus tag   MGCS35922_RS05365 Genome accession   NZ_CP118097
Coordinates   1050644..1051714 (+) Length   356 a.a.
NCBI ID   WP_012766932.1    Uniprot ID   A0A9X9GBX6
Organism   Streptococcus dysgalactiae subsp. equisimilis strain MGCS35922     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1045644..1056714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGCS35922_RS05345 (MGCS35922_02166) - 1046465..1047112 (+) 648 WP_046159742.1 response regulator transcription factor -
  MGCS35922_RS05350 (MGCS35922_02168) - 1047096..1048166 (+) 1071 WP_084916855.1 HAMP domain-containing sensor histidine kinase -
  MGCS35922_RS05355 (MGCS35922_02170) - 1048291..1048713 (+) 423 WP_003058336.1 cupin domain-containing protein -
  MGCS35922_RS05360 (MGCS35922_02172) - 1048744..1049988 (-) 1245 Protein_996 peptidoglycan bridge formation glycyltransferase FemA/FemB family protein -
  MGCS35922_RS05365 (MGCS35922_02174) xerS 1050644..1051714 (+) 1071 WP_012766932.1 tyrosine recombinase XerS Machinery gene
  MGCS35922_RS05370 (MGCS35922_02176) - 1051791..1052231 (+) 441 WP_044565403.1 NusG domain II-containing protein -
  MGCS35922_RS05375 (MGCS35922_02178) - 1052302..1053252 (-) 951 WP_012766934.1 1,4-dihydroxy-2-naphthoate polyprenyltransferase -
  MGCS35922_RS05380 (MGCS35922_02180) - 1053242..1054294 (-) 1053 WP_148861980.1 FAD:protein FMN transferase -
  MGCS35922_RS05385 (MGCS35922_02182) - 1054365..1054871 (-) 507 WP_003057512.1 FMN-binding protein -
  MGCS35922_RS05390 (MGCS35922_02184) - 1054962..1055960 (-) 999 WP_084916849.1 polyprenyl synthetase family protein -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 41385.62 Da        Isoelectric Point: 9.5512

>NTDB_id=721328 MGCS35922_RS05365 WP_012766932.1 1050644..1051714(+) (xerS) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35922]
MRRDLLLEKIETYKAIMPWYVLEYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTDATVIADIDLATLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETMGFLEYVDKDYELKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMVIEVIRKGGKRDS
VNVAGFAKPYLEAYLAIRKNRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=721328 MGCS35922_RS05365 WP_012766932.1 1050644..1051714(+) (xerS) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35922]
ATGAGACGTGATTTATTACTCGAAAAAATAGAAACTTATAAAGCTATCATGCCTTGGTATGTGTTAGAATACTATCAGTC
AAAATTGGCTGTCCCATACAGTTTTACAACGCTATATGAGTATTTAAAAGAATACAAACGTTTTTTTGACTGGTTAATGG
ATGCTGACTTAACGGATGCGACTGTCATTGCTGATATCGATTTAGCGACTCTTGAACACTTGACTAAGAAAGATTTAGAG
GCCTTTGTTCTGTACCTAAGAGAACGCCCTTCTCTTAATACTTATTCCACCAAAGAGGGTCTTTCTCAAACAACGATTAA
TCGCACTTTGTCTGCTTTATCAAGCCTTTATAAATATTTGACTGAAGAGGTTGAAAATGATCAGGGAGAGCCTTATTTTT
ATCGGAATGTCATGAAGAAGGTGTCCACGAAGAAGAAAAAAGAAACCCTAGCTTCTAGAGCTGAAAACATTAAACAAAAG
CTTTTTTTAGGGGATGAAACCATGGGTTTTCTAGAGTATGTAGATAAGGACTATGAACTCAAATTATCCAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAAGAGAGAGATCTAGCTATTATTGCCCTACTACTGGCCTCAGGCGTTCGTCTATCAGAAG
CCGTTAATCTTGATTTAAAAGATGTTAACCTTAATATGATGGTTATTGAGGTTATCCGCAAAGGGGGAAAACGAGATTCA
GTGAATGTTGCAGGTTTTGCTAAACCTTATTTAGAAGCTTATCTGGCTATTCGCAAGAATCGTTATAAGGCTGAAAAACA
AGACCTTGCCTTCTTTTTAACGGAATATCGAGGAGTCCCTAATCGCATGGACGCCTCCAGTATTGAAAAAATGGTTGGTA
AATACTCTCAAGATTTTAAAATTCGTGTGACTCCTCATAAGTTACGACACACATTAGCCACACGTCTTTATGATGCGACC
AAGTCACAGGTTTTGGTTAGTCATCAATTGGGGCATGCATCGACTCAAGTTACCGATTTGTATACCCATATTGTTAACGA
TGAACAAAAAAACGCCTTAGACAAATTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9X9GBX6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

80.618

100

0.806