Detailed information NTG0721222

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: NQK33_RS03260
• Genome accession: NZ_CP103055
• Coordinates: 651659..652618 (-)
• Length: 319 a.a.
• NCBI ID: WP_002790123.1
• Uniprot ID: -
• Organism: Campylobacter coli strain YC3-24
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 646659..657618

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQK33_RS03230 (NQK33_03230)	-	647624..647824 (+)	201	WP_002777240.1	cbb3-type cytochrome oxidase assembly protein	-
NQK33_RS03235 (NQK33_03235)	-	647854..648153 (-)	300	WP_002777238.1	cytochrome c	-
NQK33_RS03240 (NQK33_03240)	-	648230..648793 (+)	564	WP_002787747.1	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	-
NQK33_RS03245 (NQK33_03245)	rfaD	648790..649743 (+)	954	WP_258749879.1	ADP-glyceromanno-heptose 6-epimerase	-
NQK33_RS03250 (NQK33_03250)	rfaE1	649736..651121 (+)	1386	WP_258749880.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
NQK33_RS03255 (NQK33_03255)	gmhA	651118..651678 (+)	561	WP_002780618.1	D-sedoheptulose 7-phosphate isomerase	-
NQK33_RS03260 (NQK33_03260)	waaF	651659..652618 (-)	960	WP_002790123.1	lipopolysaccharide heptosyltransferase II	Regulator
NQK33_RS03265 (NQK33_03265)	-	652677..653495 (+)	819	WP_002780620.1	glycosyltransferase family 2 protein	-
NQK33_RS03270 (NQK33_03270)	-	653591..654634 (+)	1044	WP_168207695.1	polysaccharide pyruvyl transferase family protein	-
NQK33_RS03275 (NQK33_03275)	-	655121..655465 (+)	345	WP_002780624.1	hypothetical protein	-
NQK33_RS03280 (NQK33_03280)	-	655475..655663 (+)	189	WP_032682936.1	sulfatase-like hydrolase/transferase	-
NQK33_RS03285 (NQK33_03285)	-	655668..656444 (+)	777	WP_050560283.1	sulfatase-like hydrolase/transferase	-
NQK33_RS03290 (NQK33_03290)	-	656541..656813 (+)	273	WP_002780626.1	hypothetical protein	-
NQK33_RS03295 (NQK33_03295)	-	656999..657133 (+)	135	WP_002780627.1	hypothetical protein	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36735.26 Da
• Isoelectric Point: 10.3041

>NTDB_id=721222 NQK33_RS03260 WP_002790123.1 651659..652618(-) (waaF) [Campylobacter coli strain YC3-24]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLNTKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEIVIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAKLVYLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=721222 NQK33_RS03260 WP_002790123.1 651659..652618(-) (waaF) [Campylobacter coli strain YC3-24]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGACGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCCAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAATACAAAAGCTCATTTTAAGGACTTAA
AACTTCCATTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTGT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTGTATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGTATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.671	100	0.947