Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   PUW52_RS02610 Genome accession   NZ_CP118078
Coordinates   499946..500632 (+) Length   228 a.a.
NCBI ID   WP_003073462.1    Uniprot ID   A0ABS3GAQ5
Organism   Streptococcus anginosus strain VSI16     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 494946..505632
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW52_RS02595 (PUW52_02595) - 495743..495988 (-) 246 WP_024052022.1 SemiSWEET family transporter -
  PUW52_RS02600 (PUW52_02600) metG 496238..498235 (+) 1998 WP_274984565.1 methionine--tRNA ligase -
  PUW52_RS02605 (PUW52_02605) - 498671..499852 (-) 1182 WP_274984566.1 DUF2974 domain-containing protein -
  PUW52_RS02610 (PUW52_02610) braR 499946..500632 (+) 687 WP_003073462.1 response regulator transcription factor Regulator
  PUW52_RS02615 (PUW52_02615) - 500616..501596 (+) 981 WP_024052018.1 sensor histidine kinase -
  PUW52_RS02620 (PUW52_02620) - 501719..502477 (+) 759 WP_070672473.1 TraX family protein -
  PUW52_RS02625 (PUW52_02625) - 502539..502667 (+) 129 WP_024052016.1 hypothetical protein -
  PUW52_RS02630 (PUW52_02630) - 502682..503449 (+) 768 WP_070241572.1 ABC transporter ATP-binding protein -
  PUW52_RS02635 (PUW52_02635) - 503442..505430 (+) 1989 WP_070672407.1 ABC transporter permease -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 26383.70 Da        Isoelectric Point: 5.0048

>NTDB_id=720984 PUW52_RS02610 WP_003073462.1 499946..500632(+) (braR) [Streptococcus anginosus strain VSI16]
MHKILLVEDDAVIRQQVKKMLEQWGFEVIAVEDFMQVLTIFVKEEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDNNVLLAKVQGLLRRSYEFGTDQSLLEYHGVILNLKSMDMMYDGEVITLTKNEFQIL
RVLFEHSGSIVSRDDLMKELWNSDFFIDDNTLSVNVARLRKKLEEVGLKNFIETKKGIGYRLINGTSE

Nucleotide


Download         Length: 687 bp        

>NTDB_id=720984 PUW52_RS02610 WP_003073462.1 499946..500632(+) (braR) [Streptococcus anginosus strain VSI16]
ATGCACAAGATATTATTAGTGGAAGACGATGCCGTCATTCGTCAACAAGTCAAAAAAATGCTGGAACAATGGGGATTTGA
GGTGATTGCTGTAGAGGATTTTATGCAGGTGCTGACGATTTTTGTCAAGGAAGAACCGCATCTAGTCCTGATGGATATTG
GTCTACCGTTGTTTAATGGTTATCATTGGTGCCAAGAAATTCGCAAGATTTCTAAAGTGCCTATTATGTTTTTATCTTCA
CGTGATCAGGCGATGGATATTGTCATGGCGATTAACATGGGCGGAGATGATTTTGTGACGAAGCCATTTGACAATAATGT
CTTGTTGGCTAAGGTTCAAGGACTCTTGCGTCGTTCGTATGAATTTGGGACAGATCAAAGTTTGTTGGAATACCATGGGG
TTATTCTCAATCTCAAGTCCATGGATATGATGTATGATGGAGAAGTGATTACGTTAACGAAAAATGAATTTCAAATTCTG
CGTGTGCTATTTGAGCATTCTGGCAGTATTGTTTCGCGTGATGATCTCATGAAAGAACTTTGGAATAGTGATTTCTTTAT
TGATGATAATACCTTATCTGTGAATGTTGCACGGCTGCGCAAGAAATTAGAAGAAGTCGGTCTCAAGAATTTCATTGAAA
CAAAGAAAGGTATAGGGTACAGGTTAATTAATGGAACATCAGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

49.545

96.491

0.478