Detailed information NTG0720901

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: PUW49_RS05475
• Genome accession: NZ_CP118054
• Coordinates: 1086330..1087442 (-)
• Length: 370 a.a.
• NCBI ID: WP_003024631.1
• Uniprot ID: A0A0P0N8U3
• Organism: Streptococcus anginosus strain VSI37
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 1081330..1092442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUW49_RS05450 (PUW49_05450)	msrA	1082493..1083065 (-)	573	Protein_1037	peptide-methionine (S)-S-oxide reductase MsrA	-
PUW49_RS05455 (PUW49_05455)	-	1083075..1083638 (-)	564	WP_101750382.1	redoxin domain-containing protein	-
PUW49_RS05460 (PUW49_05460)	ccdA2	1083652..1084365 (-)	714	WP_274995273.1	thiol-disulfide oxidoreductase-associated membrane protein CcdA2	-
PUW49_RS05465 (PUW49_05465)	brnQ	1084499..1085827 (-)	1329	WP_101750380.1	branched-chain amino acid transport system II carrier protein	-
PUW49_RS05470 (PUW49_05470)	-	1085982..1086311 (-)	330	WP_003024629.1	metal-sulfur cluster assembly factor	-
PUW49_RS05475 (PUW49_05475)	rpoS	1086330..1087442 (-)	1113	WP_003024631.1	RNA polymerase sigma factor RpoD	Regulator
PUW49_RS05480 (PUW49_05480)	dnaG	1087445..1089220 (-)	1776	WP_280921973.1	DNA primase	-
PUW49_RS05485 (PUW49_05485)	mscL	1089375..1089755 (+)	381	WP_022525808.1	large conductance mechanosensitive channel protein MscL	-
PUW49_RS05490 (PUW49_05490)	rpsU	1090002..1090178 (-)	177	WP_000048054.1	30S ribosomal protein S21	-
PUW49_RS05495 (PUW49_05495)	-	1090373..1090711 (-)	339	WP_003024641.1	ATP cone domain-containing protein	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42439.09 Da
• Isoelectric Point: 4.4643

>NTDB_id=720901 PUW49_RS05475 WP_003024631.1 1086330..1087442(-) (rpoS) [Streptococcus anginosus strain VSI37]
MATKQKEVTTFDVQVAEFIRNHKKTGTATDDEINDRLVIPFTLEADGIEDLLQRIQDAGIAITDKEGNPSERVLNTEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAVLVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED

Nucleotide

• Length: 1113 bp

>NTDB_id=720901 PUW49_RS05475 WP_003024631.1 1086330..1087442(-) (rpoS) [Streptococcus anginosus strain VSI37]
ATGGCTACAAAACAAAAAGAAGTAACAACTTTTGATGTTCAAGTTGCAGAATTTATTCGCAACCATAAAAAAACTGGTAC
AGCAACCGATGATGAAATCAATGATCGGCTAGTCATTCCATTTACTTTGGAAGCTGATGGCATTGAAGATCTTCTTCAAC
GGATTCAGGACGCAGGGATTGCTATTACGGATAAAGAAGGCAACCCAAGTGAACGGGTTTTAAATACAGAGGAAGAAGAA
GCTGAATTAACAGATGAGGAGTTGCTTGGTAGCAATTCTGCTAAAGTGAACGACCCTGTCCGTATGTATTTAAAGGAAAT
TGGTGTTGTTCCGTTATTGACCAATGAAGAAGAGCAAGAATTAGCTGTTCTTGTGGAGCAAGGCGACTTAGAAGCGAAAC
AACGTTTGGCAGAAGCTAATTTGCGGTTGGTTGTCTCTATTGCTAAGCGCTATGTTGGACGCGGCATGCAGTTTCTTGAC
TTGATTCAAGAAGGCAATATGGGATTGATGAAAGCCGTTGACAAGTTTGACTATACCAAAGGTTTCAAATTTTCGACCTA
TGCCACTTGGTGGATTCGTCAAGCGATTACTCGTGCGATTGCTGACCAAGCGCGTACGATTCGGATTCCGGTTCACATGG
TTGAGACAATCAATAAATTAGTGCGGGAGCAAAGAAATCTTTTGCAAGAATTGGGACAAGATCCAACGCCAGAACAAATT
GCTGAGCGCATGGATATGACACCAGATAAAGTTCGTGAAATTTTGAAGATTGCCCAAGAGCCGGTCTCTCTTGAAACTCC
AATTGGAGAAGAAGATGATAGTCATCTTGGCGATTTCATTGAGGATGAAGTGATTGAAAATCCAGTTGATTACACAACAC
GTATTGTCCTACGTGAGCAATTAGACGAGGTTCTTGATACATTAACAGACCGTGAAGAAAATGTACTACGTTTGCGATTC
GGTCTAGATGATGGTAAAATGCGTACGTTGGAAGATGTTGGAAAAGTCTTTAACGTGACTCGTGAACGGATTCGACAAAT
TGAGGCCAAAGCCCTACGCAAATTGCGTCATCCAAGTCGTAGCAAGCCACTTCGTGACTTTATTGAGGATTAG

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (215-291)

• Sigma-70 region 2 (Sigma70_r2) (136-205)

• Sigma-70, region 4 (Sigma70_r4) (304-357)

• Sigma-70 factor, region 1.1 (Sigma70_r1_1) (14-87)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (98-130)

3D structure

• AlphaFold DB: A0A0P0N8U3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	46.918	78.919	0.37