Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   PUW71_RS02565 Genome accession   NZ_CP118053
Coordinates   494001..494687 (+) Length   228 a.a.
NCBI ID   WP_024052019.1    Uniprot ID   A0AAW5TJJ6
Organism   Streptococcus anginosus strain VSI40     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 489001..499687
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW71_RS02550 (PUW71_02550) - 489880..490125 (-) 246 WP_024052022.1 SemiSWEET family transporter -
  PUW71_RS02555 (PUW71_02555) metG 490375..492372 (+) 1998 WP_024052021.1 methionine--tRNA ligase -
  PUW71_RS02560 (PUW71_02560) - 492726..493907 (-) 1182 WP_024052020.1 DUF2974 domain-containing protein -
  PUW71_RS02565 (PUW71_02565) braR 494001..494687 (+) 687 WP_024052019.1 response regulator transcription factor Regulator
  PUW71_RS02570 (PUW71_02570) - 494671..495651 (+) 981 WP_024052018.1 sensor histidine kinase -
  PUW71_RS02575 (PUW71_02575) - 495774..496532 (+) 759 WP_042754036.1 TraX family protein -
  PUW71_RS02580 (PUW71_02580) - 496594..496722 (+) 129 WP_024052016.1 hypothetical protein -
  PUW71_RS02585 (PUW71_02585) - 496737..497504 (+) 768 WP_070815186.1 ABC transporter ATP-binding protein -
  PUW71_RS02590 (PUW71_02590) - 497497..499485 (+) 1989 WP_070241573.1 ABC transporter permease -

Sequence


Protein


Download         Length: 228 a.a.        Molecular weight: 26431.79 Da        Isoelectric Point: 5.1597

>NTDB_id=720765 PUW71_RS02565 WP_024052019.1 494001..494687(+) (braR) [Streptococcus anginosus strain VSI40]
MHKILLVEDDAVIRQQVKKMLEQWGFEVIAVEDFMQVLTIFVKEEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDNNVLLAKVQGLLRRSYEFGTDQSLLEYHGVILNLKSMDMMYYGEVITLTKNEFQIL
RVLFEHSGSIVSRDDLMKELWNSDFFIDDNTLSVNVARLRKKLEEVGLKNFIETKKGIGYRLINGTSE

Nucleotide


Download         Length: 687 bp        

>NTDB_id=720765 PUW71_RS02565 WP_024052019.1 494001..494687(+) (braR) [Streptococcus anginosus strain VSI40]
ATGCACAAGATATTATTAGTGGAAGACGATGCCGTCATTCGTCAACAAGTCAAAAAAATGCTGGAACAATGGGGATTTGA
GGTGATTGCTGTAGAGGATTTTATGCAGGTGCTGACGATTTTTGTCAAGGAAGAACCGCATCTAGTCCTGATGGATATTG
GTCTACCGTTGTTTAATGGTTATCATTGGTGCCAAGAAATTCGCAAGATTTCTAAAGTGCCTATTATGTTTTTATCTTCA
CGTGATCAGGCGATGGATATTGTCATGGCGATTAACATGGGCGGAGATGATTTTGTGACGAAGCCATTTGACAATAATGT
CTTGTTGGCTAAGGTTCAAGGACTCTTGCGTCGTTCGTATGAATTTGGGACAGATCAAAGTTTGTTGGAATACCATGGGG
TTATTCTCAATCTCAAGTCCATGGATATGATGTATTATGGAGAAGTGATTACGTTAACGAAAAATGAATTTCAAATTCTG
CGTGTGCTATTTGAGCATTCTGGCAGTATTGTTTCGCGTGATGATCTCATGAAAGAACTTTGGAATAGTGATTTCTTTAT
TGATGATAATACCTTATCTGTGAATGTTGCACGGCTGCGCAAGAAATTAGAAGAAGTCGGTCTCAAGAATTTCATTGAAA
CAAAGAAAGGTATAGGGTACAGGTTAATTAATGGAACATCAGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AAW5TJJ6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

49.545

96.491

0.478