Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   PUW62_RS08545 Genome accession   NZ_CP118046
Coordinates   1692346..1692804 (-) Length   152 a.a.
NCBI ID   WP_024052691.1    Uniprot ID   A0A412PMS8
Organism   Streptococcus anginosus strain VSI52     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1687346..1697804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW62_RS08525 (PUW62_08525) - 1687607..1688333 (-) 727 Protein_1637 GntR family transcriptional regulator -
  PUW62_RS08530 (PUW62_08530) - 1688367..1688492 (-) 126 Protein_1638 PTS cellobiose transporter subunit IIC -
  PUW62_RS08535 (PUW62_08535) rcrQ 1688837..1690597 (-) 1761 WP_274996962.1 ABC transporter ATP-binding protein Regulator
  PUW62_RS08540 (PUW62_08540) rcrP 1690587..1692353 (-) 1767 WP_024052690.1 ABC transporter ATP-binding protein Regulator
  PUW62_RS08545 (PUW62_08545) rcrR 1692346..1692804 (-) 459 WP_024052691.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  PUW62_RS08550 (PUW62_08550) - 1692961..1693371 (-) 411 WP_024052692.1 peptide deformylase -
  PUW62_RS08555 (PUW62_08555) scrK 1693439..1694338 (-) 900 WP_024052693.1 fructokinase ScrK -
  PUW62_RS08560 (PUW62_08560) - 1694614..1696512 (-) 1899 WP_024052694.1 sucrose-specific PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17846.77 Da        Isoelectric Point: 7.3245

>NTDB_id=720702 PUW62_RS08545 WP_024052691.1 1692346..1692804(-) (rcrR) [Streptococcus anginosus strain VSI52]
MEKPLLEFKRFGRKTHLMIQKIAKERGIEFMAGPQGQVLHFVNHREDCDKMTFIKDIEQELGITKSVASNLMKRMVKNGL
IYLEVSETDKRAKIIRLTPESKERMNKIRDFFDEMDHCLLTDISEEDLVTFFQVMGKFYQNIEKLEKGEANG

Nucleotide


Download         Length: 459 bp        

>NTDB_id=720702 PUW62_RS08545 WP_024052691.1 1692346..1692804(-) (rcrR) [Streptococcus anginosus strain VSI52]
ATGGAAAAACCATTATTGGAATTCAAGCGATTTGGACGGAAGACACATCTGATGATTCAAAAAATTGCCAAAGAGCGAGG
GATTGAATTTATGGCGGGTCCACAAGGACAAGTATTGCATTTTGTGAATCATCGAGAAGATTGTGACAAGATGACCTTTA
TTAAAGATATTGAGCAGGAGTTGGGCATTACTAAGTCCGTTGCCAGTAATTTAATGAAGCGAATGGTGAAGAATGGCTTG
ATTTATCTGGAAGTGAGTGAGACTGATAAACGCGCTAAGATTATTCGTTTAACGCCGGAATCAAAAGAGCGCATGAATAA
AATTCGTGATTTTTTTGATGAAATGGATCATTGCCTATTGACAGATATTTCAGAAGAAGATTTGGTTACTTTTTTTCAAG
TGATGGGGAAATTTTACCAGAATATTGAAAAATTAGAAAAAGGAGAAGCGAATGGTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A412PMS8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

43.836

96.053

0.421