Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   PUW62_RS03080 Genome accession   NZ_CP118046
Coordinates   620169..620855 (+) Length   228 a.a.
NCBI ID   WP_274997353.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI52     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 615169..625855
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW62_RS03065 (PUW62_03065) - 615966..616211 (-) 246 WP_024052022.1 SemiSWEET family transporter -
  PUW62_RS03070 (PUW62_03070) metG 616461..618458 (+) 1998 WP_024052021.1 methionine--tRNA ligase -
  PUW62_RS03075 (PUW62_03075) - 618894..620075 (-) 1182 WP_024052020.1 DUF2974 domain-containing protein -
  PUW62_RS03080 (PUW62_03080) braR 620169..620855 (+) 687 WP_274997353.1 response regulator transcription factor Regulator
  PUW62_RS03085 (PUW62_03085) - 620839..621819 (+) 981 WP_024052018.1 sensor histidine kinase -
  PUW62_RS03090 (PUW62_03090) - 621942..622700 (+) 759 WP_070672473.1 TraX family protein -
  PUW62_RS03095 (PUW62_03095) - 622762..622890 (+) 129 WP_024052016.1 hypothetical protein -
  PUW62_RS03100 (PUW62_03100) - 623025..623671 (+) 647 Protein_571 ABC transporter ATP-binding protein -
  PUW62_RS03105 (PUW62_03105) - 623664..625651 (+) 1988 Protein_572 ABC transporter permease -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 26397.73 Da        Isoelectric Point: 5.0048

>NTDB_id=720659 PUW62_RS03080 WP_274997353.1 620169..620855(+) (braR) [Streptococcus anginosus strain VSI52]
MHKILLVEDDAVIRQQVKKMLEQWGFEVIAVEDFMQVLTIFVKEEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIIMAINMGGDDFVTKPFDNNVLLAKVQGLLRRSYEFGTDQSLLEYHGVILNLKSMDMMYDGEVITLTKNEFQIL
RVLFEHSGSIVSRDDLMKELWNSDFFIDDNTLSVNVARLRKKLEEVGLKNFIETKKGIGYRLINGTSE

Nucleotide


Download         Length: 687 bp        

>NTDB_id=720659 PUW62_RS03080 WP_274997353.1 620169..620855(+) (braR) [Streptococcus anginosus strain VSI52]
ATGCACAAGATATTATTAGTGGAAGACGATGCCGTCATTCGTCAACAAGTCAAAAAAATGCTGGAACAATGGGGATTTGA
GGTGATTGCTGTAGAGGATTTTATGCAGGTGCTGACGATTTTTGTCAAGGAAGAACCGCATCTAGTCCTGATGGATATTG
GTCTACCGTTGTTTAATGGTTATCATTGGTGCCAAGAAATTCGCAAGATTTCTAAAGTGCCTATTATGTTTTTATCTTCA
CGTGATCAGGCGATGGATATTATCATGGCGATTAACATGGGCGGAGATGATTTTGTGACGAAGCCATTTGACAATAATGT
CTTGTTGGCTAAGGTTCAAGGACTCTTGCGTCGTTCGTATGAATTTGGGACAGATCAAAGTTTGTTGGAATACCATGGGG
TTATTCTCAATCTCAAGTCCATGGATATGATGTATGATGGAGAAGTGATTACGTTAACGAAAAATGAATTTCAAATTCTG
CGTGTGCTATTTGAGCATTCTGGCAGTATTGTTTCGCGTGATGATCTCATGAAAGAACTTTGGAATAGTGATTTCTTTAT
TGATGATAATACCTTATCTGTGAATGTTGCACGGCTGCGCAAGAAATTAGAAGAAGTCGGTCTCAAGAATTTCATTGAAA
CAAAGAAAGGTATAGGGTACAGGTTAATTAATGGAACATCAGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

50

96.491

0.482