Detailed information    

insolico Bioinformatically predicted

Overview


Name   yaaT   Type   Regulator
Locus tag   JQN53_RS10510 Genome accession   NZ_AP024301
Coordinates   1951543..1952310 (-) Length   255 a.a.
NCBI ID   WP_008633812.1    Uniprot ID   H7GIJ2
Organism   Thermus thermophilus strain HB5002     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context


Location: 1946543..1957310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQN53_RS10480 (TthHB5002_20860) - 1946831..1947283 (+) 453 WP_011173877.1 arsenate reductase ArsC -
  JQN53_RS10485 (TthHB5002_20870) ubiE 1947280..1947942 (-) 663 WP_259331185.1 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE -
  JQN53_RS10490 (TthHB5002_20880) - 1948034..1949848 (+) 1815 WP_203971297.1 ABC transporter permease -
  JQN53_RS10495 (TthHB5002_20890) - 1949845..1950768 (+) 924 WP_011228963.1 ABC transporter permease -
  JQN53_RS10500 (TthHB5002_20900) - 1950756..1951013 (-) 258 WP_011173881.1 hypothetical protein -
  JQN53_RS10505 (TthHB5002_20910) - 1951010..1951546 (-) 537 WP_203971299.1 flavin reductase family protein -
  JQN53_RS10510 (TthHB5002_20920) yaaT 1951543..1952310 (-) 768 WP_008633812.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  JQN53_RS10515 (TthHB5002_20930) - 1952307..1953113 (-) 807 WP_203971301.1 DNA polymerase III subunit delta' -
  JQN53_RS10520 (TthHB5002_20940) - 1953080..1953802 (-) 723 WP_143586752.1 metallophosphoesterase -
  JQN53_RS10525 (TthHB5002_20950) - 1953817..1954446 (+) 630 WP_203971303.1 hypothetical protein -
  JQN53_RS10530 (TthHB5002_20960) - 1954457..1954657 (+) 201 WP_011173886.1 hypothetical protein -
  JQN53_RS10535 (TthHB5002_20970) - 1954654..1955808 (-) 1155 WP_203971305.1 extracellular solute-binding protein -
  JQN53_RS10540 (TthHB5002_20980) - 1955815..1957002 (-) 1188 WP_011173888.1 ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 28411.94 Da        Isoelectric Point: 9.1250

>NTDB_id=72061 JQN53_RS10510 WP_008633812.1 1951543..1952310(-) (yaaT) [Thermus thermophilus strain HB5002]
MTVGVRFRTPVLRYVRFRGEAPPVDAFVVVRTGRGLEVGRVRTPPVDRPASGEVVRLASKEDLDRAARLRARAEEALHFV
RARFREEGVRAKVLGCDFTLDGRHLVIHYSAEERVNLRRFAPELARALGARIEFVAEGPREEAQYLGTLGACGMESCCST
WLQGFAQVSIKLARDQQLPLNPEKISGPCGRLLCCLTYEHPVYQELLKELPKKNARVCTKAGLCGKVQKVNPLKGTVELH
LEDGKTLEVPKEDLA

Nucleotide


Download         Length: 768 bp        

>NTDB_id=72061 JQN53_RS10510 WP_008633812.1 1951543..1952310(-) (yaaT) [Thermus thermophilus strain HB5002]
ATGACCGTGGGCGTACGCTTCCGCACCCCCGTCCTCCGCTACGTCCGCTTCCGGGGGGAGGCCCCGCCCGTGGACGCCTT
CGTGGTGGTCCGCACCGGGCGGGGGCTGGAGGTGGGCCGGGTCCGCACCCCCCCCGTGGACCGGCCGGCCTCGGGGGAGG
TGGTGCGGCTCGCCTCCAAGGAGGACCTGGACCGGGCCGCGAGGCTCCGCGCCCGGGCGGAGGAGGCCCTCCACTTCGTC
CGGGCCCGGTTCCGGGAGGAGGGGGTGCGGGCCAAGGTCCTGGGGTGCGACTTCACCCTGGACGGCCGCCACCTCGTCAT
CCACTACAGCGCCGAGGAGCGGGTGAACCTGAGGCGCTTTGCCCCCGAGCTCGCCCGCGCCCTGGGGGCCCGGATTGAGT
TCGTGGCCGAAGGCCCCCGGGAGGAGGCCCAGTACCTTGGGACCTTGGGGGCCTGCGGCATGGAGTCCTGCTGCTCCACC
TGGCTCCAGGGCTTCGCCCAGGTGTCCATCAAGCTCGCCCGGGACCAGCAGCTTCCCCTGAACCCGGAGAAGATCTCGGG
CCCCTGCGGGAGGCTTCTCTGCTGCCTCACCTACGAGCACCCCGTCTACCAGGAGCTTCTCAAGGAGCTTCCCAAGAAGA
ACGCCCGGGTCTGCACCAAGGCCGGCCTCTGCGGCAAGGTGCAGAAGGTGAACCCCCTGAAGGGCACGGTGGAGCTCCAC
CTGGAGGACGGGAAGACCTTGGAGGTTCCCAAGGAGGATCTGGCATGA

Domains


Predicted by InterProScan.

(53-135)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB H7GIJ2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

35.249

100

0.361


Multiple sequence alignment