Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   NW973_RS13405 Genome accession   NZ_CP102961
Coordinates   2694942..2695829 (-) Length   295 a.a.
NCBI ID   WP_000143419.1    Uniprot ID   A0A266CLT2
Organism   Staphylococcus aureus strain 03-RR-88     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2689942..2700829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW973_RS13375 (NW973_13375) - 2689961..2690053 (+) 93 WP_010956583.1 hypothetical protein -
  NW973_RS13380 (NW973_13380) - 2690161..2690658 (-) 498 WP_153159376.1 glutathione peroxidase -
  NW973_RS13385 (NW973_13385) - 2690668..2690928 (-) 261 WP_001791974.1 hypothetical protein -
  NW973_RS13390 (NW973_13390) - 2691310..2691423 (-) 114 WP_072384844.1 hypothetical protein -
  NW973_RS13395 (NW973_13395) - 2692082..2694082 (-) 2001 WP_258410878.1 ABC transporter permease -
  NW973_RS13400 (NW973_13400) - 2694079..2694834 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  NW973_RS13405 (NW973_13405) braS 2694942..2695829 (-) 888 WP_000143419.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  NW973_RS13410 (NW973_13410) braR 2695840..2696505 (-) 666 WP_000697886.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  NW973_RS13415 (NW973_13415) - 2696531..2696731 (-) 201 WP_000604727.1 hypothetical protein -
  NW973_RS13420 (NW973_13420) - 2696929..2698353 (+) 1425 WP_000953744.1 alkaline phosphatase -
  NW973_RS13870 - 2698413..2698514 (-) 102 WP_000731972.1 SE2200 family small protein -
  NW973_RS13430 (NW973_13430) - 2698636..2699091 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  NW973_RS13435 (NW973_13435) - 2699336..2700097 (-) 762 WP_000323448.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34019.28 Da        Isoelectric Point: 6.0874

>NTDB_id=720602 NW973_RS13405 WP_000143419.1 2694942..2695829(-) (braS) [Staphylococcus aureus strain 03-RR-88]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLHVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=720602 NW973_RS13405 WP_000143419.1 2694942..2695829(-) (braS) [Staphylococcus aureus strain 03-RR-88]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTGTTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTACACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACACACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A266CLT2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.661

100

0.997