Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   PUW70_RS08170 Genome accession   NZ_CP118029
Coordinates   1615337..1615795 (-) Length   152 a.a.
NCBI ID   WP_024052691.1    Uniprot ID   A0A412PMS8
Organism   Streptococcus anginosus strain VSI68     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1610337..1620795
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW70_RS08150 (PUW70_08150) - 1610599..1611324 (-) 726 WP_070815099.1 GntR family transcriptional regulator -
  PUW70_RS08155 (PUW70_08155) - 1611358..1611483 (-) 126 Protein_1563 PTS cellobiose transporter subunit IIC -
  PUW70_RS08160 (PUW70_08160) rcrQ 1611828..1613588 (-) 1761 WP_024052689.1 ABC transporter ATP-binding protein Regulator
  PUW70_RS08165 (PUW70_08165) rcrP 1613578..1615344 (-) 1767 WP_024052690.1 ABC transporter ATP-binding protein Regulator
  PUW70_RS08170 (PUW70_08170) rcrR 1615337..1615795 (-) 459 WP_024052691.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  PUW70_RS08175 (PUW70_08175) - 1615932..1616342 (-) 411 WP_024052692.1 peptide deformylase -
  PUW70_RS08180 (PUW70_08180) scrK 1616410..1617309 (-) 900 WP_024052693.1 fructokinase ScrK -
  PUW70_RS08185 (PUW70_08185) - 1617585..1619483 (-) 1899 WP_024052694.1 sucrose-specific PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17846.77 Da        Isoelectric Point: 7.3245

>NTDB_id=720401 PUW70_RS08170 WP_024052691.1 1615337..1615795(-) (rcrR) [Streptococcus anginosus strain VSI68]
MEKPLLEFKRFGRKTHLMIQKIAKERGIEFMAGPQGQVLHFVNHREDCDKMTFIKDIEQELGITKSVASNLMKRMVKNGL
IYLEVSETDKRAKIIRLTPESKERMNKIRDFFDEMDHCLLTDISEEDLVTFFQVMGKFYQNIEKLEKGEANG

Nucleotide


Download         Length: 459 bp        

>NTDB_id=720401 PUW70_RS08170 WP_024052691.1 1615337..1615795(-) (rcrR) [Streptococcus anginosus strain VSI68]
ATGGAAAAACCATTATTGGAATTCAAGCGATTTGGACGGAAGACACATCTGATGATTCAAAAAATTGCCAAAGAGCGAGG
GATTGAATTTATGGCGGGTCCACAAGGACAAGTATTGCATTTTGTGAATCATCGAGAAGATTGTGACAAGATGACCTTTA
TTAAAGATATTGAGCAGGAGTTGGGCATTACTAAGTCCGTTGCCAGTAATTTAATGAAGCGAATGGTGAAGAATGGCTTG
ATTTATCTGGAAGTGAGTGAGACTGATAAACGCGCTAAGATTATTCGTTTAACGCCGGAATCAAAAGAGCGCATGAATAA
AATTCGTGATTTTTTTGATGAAATGGATCATTGCCTATTGACAGATATTTCAGAAGAAGATTTGGTTACTTTTTTTCAAG
TGATGGGGAAATTTTACCAGAATATTGAAAAATTAGAAAAAGGAGAAGCGAATGGTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A412PMS8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

43.836

96.053

0.421