Detailed information NTG0720381

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: PUW70_RS05070
• Genome accession: NZ_CP118029
• Coordinates: 994086..995198 (-)
• Length: 370 a.a.
• NCBI ID: WP_274996380.1
• Uniprot ID: -
• Organism: Streptococcus anginosus strain VSI68
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 989086..1000198

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUW70_RS05045 (PUW70_05045)	msrA	990249..990821 (-)	573	Protein_953	peptide-methionine (S)-S-oxide reductase MsrA	-
PUW70_RS05050 (PUW70_05050)	-	990831..991394 (-)	564	WP_101750382.1	redoxin domain-containing protein	-
PUW70_RS05055 (PUW70_05055)	ccdA2	991408..992121 (-)	714	WP_274995273.1	thiol-disulfide oxidoreductase-associated membrane protein CcdA2	-
PUW70_RS05060 (PUW70_05060)	brnQ	992255..993583 (-)	1329	WP_101750380.1	branched-chain amino acid transport system II carrier protein	-
PUW70_RS05065 (PUW70_05065)	-	993738..994067 (-)	330	WP_003024629.1	metal-sulfur cluster assembly factor	-
PUW70_RS05070 (PUW70_05070)	rpoS	994086..995198 (-)	1113	WP_274996380.1	RNA polymerase sigma factor RpoD	Regulator
PUW70_RS05075 (PUW70_05075)	dnaG	995201..996976 (-)	1776	WP_280921973.1	DNA primase	-
PUW70_RS05080 (PUW70_05080)	mscL	997131..997511 (+)	381	WP_022525808.1	large conductance mechanosensitive channel protein MscL	-
PUW70_RS05085 (PUW70_05085)	rpsU	997758..997934 (-)	177	WP_000048054.1	30S ribosomal protein S21	-
PUW70_RS05090 (PUW70_05090)	-	998129..998467 (-)	339	WP_003024641.1	ATP cone domain-containing protein	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42386.04 Da
• Isoelectric Point: 4.4351

>NTDB_id=720381 PUW70_RS05070 WP_274996380.1 994086..995198(-) (rpoS) [Streptococcus anginosus strain VSI68]
MATKQKEVTTFDVQVAEFIRNHKKTGTATDDEINDRLVIPFTLEADGIEDLLQRIQDAGIAITDKEGNPSERVLNTEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAVLVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQLDEVLDTLTDREENVLCLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED

Nucleotide

• Length: 1113 bp

>NTDB_id=720381 PUW70_RS05070 WP_274996380.1 994086..995198(-) (rpoS) [Streptococcus anginosus strain VSI68]
ATGGCTACAAAACAAAAAGAAGTAACAACTTTTGATGTTCAAGTTGCAGAATTTATTCGCAACCATAAAAAAACTGGTAC
AGCAACCGATGATGAAATCAATGATCGGCTAGTCATTCCATTTACTTTGGAAGCTGATGGCATTGAAGATCTTCTTCAAC
GGATTCAGGACGCAGGGATTGCTATTACGGATAAAGAAGGCAACCCAAGTGAACGGGTTTTAAATACAGAGGAAGAAGAA
GCTGAATTAACAGATGAGGAGTTGCTTGGTAGCAATTCTGCTAAAGTGAACGACCCTGTCCGTATGTATTTAAAGGAAAT
TGGTGTTGTTCCGTTATTGACCAATGAAGAAGAGCAAGAATTAGCTGTTCTTGTGGAGCAAGGCGACTTAGAAGCGAAAC
AACGTTTGGCAGAAGCTAATTTGCGGTTGGTTGTCTCTATTGCTAAGCGCTATGTTGGACGCGGCATGCAGTTTCTTGAC
TTGATTCAAGAAGGCAATATGGGATTGATGAAAGCCGTTGACAAGTTTGACTATACCAAAGGTTTCAAATTTTCGACCTA
TGCCACTTGGTGGATTCGTCAAGCGATTACTCGTGCGATTGCTGACCAAGCGCGTACGATTCGGATTCCGGTTCACATGG
TTGAGACAATCAATAAATTAGTGCGGGAGCAAAGAAATCTTTTGCAAGAATTGGGACAAGATCCAACGCCAGAACAAATT
GCTGAGCGCATGGATATGACACCAGATAAAGTTCGTGAAATTTTGAAGATTGCCCAAGAGCCGGTCTCTCTTGAAACTCC
AATTGGAGAAGAAGATGATAGTCATCTTGGCGATTTCATTGAGGATGAAGTGATTGAAAATCCAGTTGATTACACAACAC
GTATTGTCCTACGTGAGCAATTAGACGAGGTTCTTGATACATTAACAGACCGTGAAGAAAATGTACTATGTTTGCGATTC
GGTCTAGATGATGGTAAAATGCGTACGTTGGAAGATGTTGGAAAAGTCTTTAACGTGACTCGTGAACGGATTCGACAAAT
TGAGGCCAAAGCCCTACGCAAATTGCGTCATCCAAGTCGTAGCAAGCCACTTCGTGACTTTATTGAGGATTAG

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (215-291)

• Sigma-70 factor, region 1.1 (Sigma70_r1_1) (14-87)

• Sigma-70 region 2 (Sigma70_r2) (136-205)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (98-130)

• Sigma-70, region 4 (Sigma70_r4) (304-357)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	46.918	78.919	0.37