Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   NW967_RS13040 Genome accession   NZ_CP102952
Coordinates   2657154..2657819 (-) Length   221 a.a.
NCBI ID   WP_000697886.1    Uniprot ID   A0A0D3QBD0
Organism   Staphylococcus aureus strain 39-B-49     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2652154..2662819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW967_RS13020 (NW967_13020) - 2652623..2652736 (-) 114 WP_011447078.1 hypothetical protein -
  NW967_RS13025 (NW967_13025) - 2653395..2655395 (-) 2001 WP_258411396.1 ABC transporter permease -
  NW967_RS13030 (NW967_13030) - 2655392..2656147 (-) 756 WP_000923768.1 ABC transporter ATP-binding protein -
  NW967_RS13035 (NW967_13035) braS 2656256..2657143 (-) 888 WP_258410277.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  NW967_RS13040 (NW967_13040) braR 2657154..2657819 (-) 666 WP_000697886.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  NW967_RS13045 (NW967_13045) - 2657845..2658045 (-) 201 WP_000604727.1 hypothetical protein -
  NW967_RS13050 (NW967_13050) - 2658243..2659667 (+) 1425 WP_258410278.1 alkaline phosphatase -
  NW967_RS13510 - 2659727..2659828 (-) 102 WP_000731976.1 SE2200 family small protein -
  NW967_RS13060 (NW967_13060) - 2659950..2660405 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  NW967_RS13065 (NW967_13065) - 2660650..2661411 (-) 762 WP_000323448.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25392.45 Da        Isoelectric Point: 4.6846

>NTDB_id=720232 NW967_RS13040 WP_000697886.1 2657154..2657819(-) (braR) [Staphylococcus aureus strain 39-B-49]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQNQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=720232 NW967_RS13040 WP_000697886.1 2657154..2657819(-) (braR) [Staphylococcus aureus strain 39-B-49]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAGAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAAAATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATTATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D3QBD0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.548

100

0.995