Detailed information NTG0720161

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: PUN50_RS01780
• Genome accession: NZ_CP117988
• Coordinates: 379683..382505 (-)
• Length: 940 a.a.
• NCBI ID: WP_274290775.1
• Uniprot ID: -
• Organism: Vibrio campbellii strain 20220413_1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 374683..387505

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUN50_RS01765 (PUN50_01765)	lysC	374774..376126 (-)	1353	WP_274290772.1	lysine-sensitive aspartokinase 3	-
PUN50_RS01770 (PUN50_01770)	-	376653..377774 (+)	1122	WP_274290773.1	pyridoxal-phosphate-dependent aminotransferase family protein	-
PUN50_RS01775 (PUN50_01775)	-	377831..379615 (-)	1785	WP_274290774.1	PglL family O-oligosaccharyltransferase	-
PUN50_RS01780 (PUN50_01780)	uvrA	379683..382505 (-)	2823	WP_274290775.1	excinuclease ABC subunit UvrA	Machinery gene
PUN50_RS01785 (PUN50_01785)	galU	382644..383516 (-)	873	WP_005432802.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
PUN50_RS01790 (PUN50_01790)	qstR	383681..384325 (-)	645	WP_182053525.1	LuxR C-terminal-related transcriptional regulator	Regulator
PUN50_RS01795 (PUN50_01795)	ssb	384619..385155 (+)	537	WP_005432828.1	single-stranded DNA-binding protein	Machinery gene
PUN50_RS01800 (PUN50_01800)	csrD	385403..387412 (+)	2010	WP_045454907.1	RNase E specificity factor CsrD	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103913.24 Da
• Isoelectric Point: 6.4219

>NTDB_id=720161 PUN50_RS01780 WP_274290775.1 379683..382505(-) (uvrA) [Vibrio campbellii strain 20220413_1]
MDKIEVRGARTHNLKDINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHTPLAAQTISQMVDKVLELPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPPLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVAPMDGD
GEEVIFSANFACPICGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDETLSLAQGAIRGWDQKNYYYFQML
TALADHYGFDLHAPFNALPKKTQDIILKGSGRTEVEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYI
STKSCSSCGGTRLRLEARNVFIADTTLPEIVELSIADALEFFHSLQLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIAVPKERTPRDPKKTVELLGATGNNLKNVDLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNSATTAHPSPYKAIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARTFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=720161 PUN50_RS01780 WP_274290775.1 379683..382505(-) (uvrA) [Vibrio campbellii strain 20220413_1]
ATGGATAAAATAGAAGTTCGTGGTGCCCGCACCCATAACCTCAAAGACATCAACCTCACTATCCCCCGCGATAAACTGAT
TGTCATTACTGGTTTGAGTGGTTCTGGTAAATCCTCTCTCGCATTCGATACTTTGTACGCTGAAGGTCAAAGACGTTACG
TCGAATCCTTATCAGCTTACGCACGCCAGTTTTTGTCTCTTATGGAAAAACCAGATGTTGACCACATCGAAGGTTTGTCT
CCTGCGATCTCGATTGAGCAGAAATCAACATCACATAACCCACGCTCTACTGTTGGTACTATTACTGAGGTGTACGACTA
CCTGCGTCTGCTTTACGCACGCGTTGGCGAACCTCGTTGTCCAACACACCATACGCCTCTGGCCGCTCAAACCATCAGCC
AAATGGTTGATAAAGTCTTAGAGTTGCCAGAAGGCAGTAAAATGATGCTACTTGCTCCTATAGTGAAAGAGCGTAAAGGT
GAGCACGTTAAGACACTGGAAAACCTAGCAGCTCAAGGTTTCATCCGCGCACGCATCGATGGTGAAACTTGCGATCTTTC
TGATCCACCGCCGCTAGAACTGCACAAGAAACACACTATTGAAGTGGTTGTGGACCGCTTTAAAGTTCGCCCAGATTTGC
AGCAACGTTTAGCTGAATCATTCGAAACCACACTAGAGCTATCTGGCGGTATTGCTGTTGTTGCTCCAATGGACGGCGAC
GGCGAAGAGGTGATCTTCTCAGCTAACTTTGCTTGTCCTATTTGTGGCTACAGCATGCAAGAACTTGAGCCTCGTTTGTT
CTCATTCAACAACCCAGCAGGTGCGTGTGGCACTTGTGATGGTTTGGGCGTGCAGCAATATTTTGATCCAAGCCGAGTTA
TTCAAGATGAAACTCTGAGTTTGGCACAAGGTGCGATTCGAGGTTGGGATCAAAAGAACTATTACTACTTCCAGATGCTG
ACTGCACTGGCGGATCACTACGGTTTCGATCTTCACGCACCATTTAACGCTCTACCAAAGAAAACCCAAGACATCATTCT
TAAAGGATCGGGGCGTACTGAAGTCGAGTTTAAGTACATTAACGATCGTGGTGACATTCGTGTTAAGCGTCATCCTTTTG
AAGGGATTCTGAATACACTTGAACGCCGTTACCGCGATACTGAATCTAACTCAGTACGTGAAGAGCTCGCAAAATACATC
TCGACCAAGTCTTGCTCAAGCTGTGGCGGTACACGTCTGCGCCTAGAAGCACGTAACGTTTTTATTGCTGATACGACACT
ACCAGAGATCGTTGAGCTCAGCATCGCCGACGCATTGGAATTCTTCCACTCATTGCAACTAGAAGGTCAACGCGCCCAAA
TCGCTGAAAAAGTGATGAAGGAAATCAACGACCGCTTGCAGTTCTTAGTTAACGTGGGTTTGAACTACCTCAACTTATCG
CGCAGCGCGGAAACCCTATCGGGTGGTGAAGCTCAACGTATTCGTTTAGCAAGCCAAATTGGTGCTGGTTTAGTGGGCGT
CATGTATGTTCTAGATGAGCCATCGATTGGTCTCCACCAGCGTGATAACGAACGCCTATTGAAAACCCTGACCCACTTAA
GAGATTTGGGTAACACAGTATTAGTGGTTGAGCACGATGAAGATGCGATTCGTTGCGCTGATCACGTGATCGATATCGGT
CCAGGCGCAGGTGTACACGGTGGTAACGTGGTCGCTGAAGGTACGATGGACGAGATTATCGCCAATCCGAACTCACTGAC
TGGTCAGTACCTCAGTGGCGCGAAAGAGATTGCGGTACCAAAAGAGCGTACACCACGCGATCCAAAGAAAACCGTTGAAC
TACTTGGCGCGACAGGTAACAACTTAAAGAATGTCGACCTTTCCGTTCCTGTTGGCTTGTTCAGCTGTATTACCGGTGTA
TCCGGCTCAGGTAAGTCGACTCTGATCAACGATACCTTCTTTAAGATTGCTCATACCCAGTTGAACAGCGCAACAACGGC
GCACCCTTCACCATACAAAGCGATCAAAGGGTTAGAGCACTTCGATAAAGTGATCGACATTGACCAAAGTCCTATCGGTC
GTACGCCACGTTCCAACCCAGCCACTTACACGGGAATCTTTACTCCGATTCGTGAACTGTTTGCTGGCACGCAAGAGTCG
CGCTCTCGCGGTTACAAACCGGGGCGCTTTAGCTTTAACGTACGCGGAGGTCGCTGTGAAGCGTGTCAGGGTGATGGCGT
AATCAAGGTGGAAATGCACTTCTTACCTGACGTTTACGTTCCTTGTGATGTGTGTAAAGGTAAACGCTACAACCGCGAAA
CACTTGAAGTACGTTACAAAGGCAAGACCATTGATGAAGTACTGGAAATGACGGTAGAAGATGCACGTACTTTCTTCGAT
CCAGTACCAGCGATTGCTCGTAAGCTGCAAACTCTGATGGATGTAGGTTTGTCTTACATTCGCTTAGGTCAAGCGGCAAC
TACGCTGTCAGGTGGTGAAGCTCAGCGTGTAAAACTGGCTCGAGAGCTGTCTAAGCGTGATACAGGTAAAACCTTATACA
TTTTGGATGAGCCGACAACAGGTCTGCACTTCCACGATATCCAGCAGCTACTAACTGTACTGCACCGTCTGCGCGACCAC
GGAAATACCGTTGTCGTCATCGAACATAACCTCGATGTCATTAAGACGGCAGACTGGATTATCGACTTAGGCCCTGAAGG
TGGACAAGGTGGCGGTGAGATCATTGCACAAGGAACCCCTGAAGATGTGTCTCAGATCGAAGGTTCACACACAGCTCGCT
TCCTTAAGCCTATGTTGAAGTAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-859)

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.537	100	0.577
uvrA	Streptococcus pneumoniae TIGR4	57.537	100	0.577
uvrA	Streptococcus pneumoniae D39	57.537	100	0.577