Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   JMH49_RS09975 Genome accession   NZ_AP024270
Coordinates   1853820..1854587 (-) Length   255 a.a.
NCBI ID   WP_008633812.1    Uniprot ID   H7GIJ2
Organism   Thermus thermophilus strain HB5018     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1848820..1859587
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JMH49_RS09945 (TthHB5018_19760) - 1849108..1849560 (+) 453 WP_011173877.1 arsenate reductase ArsC -
  JMH49_RS09950 (TthHB5018_19770) ubiE 1849557..1850219 (-) 663 WP_024119911.1 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE -
  JMH49_RS09955 (TthHB5018_19780) - 1850311..1852125 (+) 1815 WP_201350977.1 ABC transporter permease -
  JMH49_RS09960 (TthHB5018_19790) - 1852122..1853045 (+) 924 WP_201350978.1 ABC transporter permease -
  JMH49_RS09965 (TthHB5018_19800) - 1853033..1853290 (-) 258 WP_201350979.1 hypothetical protein -
  JMH49_RS09970 (TthHB5018_19810) - 1853287..1853823 (-) 537 WP_011173882.1 flavin reductase family protein -
  JMH49_RS09975 (TthHB5018_19820) yaaT 1853820..1854587 (-) 768 WP_008633812.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  JMH49_RS09980 (TthHB5018_19830) - 1854584..1855390 (-) 807 WP_201350980.1 DNA polymerase III subunit delta' -
  JMH49_RS09985 (TthHB5018_19840) - 1855357..1856079 (-) 723 WP_011228966.1 metallophosphoesterase -
  JMH49_RS09990 (TthHB5018_19850) - 1856094..1856723 (+) 630 WP_201350981.1 hypothetical protein -
  JMH49_RS09995 (TthHB5018_19860) - 1856734..1856934 (+) 201 WP_011173886.1 hypothetical protein -
  JMH49_RS10000 (TthHB5018_19870) - 1856993..1858312 (+) 1320 WP_201350982.1 S-layer homology domain-containing protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 28411.94 Da        Isoelectric Point: 9.1250

>NTDB_id=72010 JMH49_RS09975 WP_008633812.1 1853820..1854587(-) (yaaT) [Thermus thermophilus strain HB5018]
MTVGVRFRTPVLRYVRFRGEAPPVDAFVVVRTGRGLEVGRVRTPPVDRPASGEVVRLASKEDLDRAARLRARAEEALHFV
RARFREEGVRAKVLGCDFTLDGRHLVIHYSAEERVNLRRFAPELARALGARIEFVAEGPREEAQYLGTLGACGMESCCST
WLQGFAQVSIKLARDQQLPLNPEKISGPCGRLLCCLTYEHPVYQELLKELPKKNARVCTKAGLCGKVQKVNPLKGTVELH
LEDGKTLEVPKEDLA

Nucleotide


Download         Length: 768 bp        

>NTDB_id=72010 JMH49_RS09975 WP_008633812.1 1853820..1854587(-) (yaaT) [Thermus thermophilus strain HB5018]
ATGACCGTGGGCGTACGCTTCCGCACCCCCGTCCTCCGCTACGTCCGCTTCCGGGGGGAGGCCCCGCCCGTGGACGCCTT
CGTGGTGGTCCGCACCGGGCGGGGGCTGGAGGTGGGCCGGGTCCGCACCCCCCCCGTGGACCGGCCGGCCTCGGGGGAGG
TGGTGCGGCTCGCCTCCAAGGAGGACCTGGACCGGGCCGCGAGGCTTCGCGCCCGGGCGGAGGAGGCCCTCCACTTCGTC
CGGGCCCGGTTCCGGGAGGAGGGGGTGCGGGCCAAGGTCCTGGGGTGCGACTTCACCCTGGACGGCCGCCACCTCGTCAT
CCACTACAGCGCCGAGGAGCGGGTGAACCTGAGGCGCTTTGCCCCCGAGCTCGCCCGCGCCCTGGGGGCCCGGATTGAGT
TCGTGGCCGAAGGCCCCCGGGAGGAGGCCCAGTACCTTGGGACCTTGGGGGCCTGCGGCATGGAGTCCTGCTGCTCCACC
TGGCTCCAGGGCTTCGCCCAGGTGTCCATCAAGCTCGCCCGGGACCAGCAGCTTCCCCTGAACCCGGAGAAGATCTCGGG
CCCCTGTGGGAGGCTTCTCTGCTGCCTCACCTACGAGCACCCCGTCTACCAGGAGCTTCTCAAGGAGCTTCCCAAGAAGA
ACGCCCGGGTCTGCACCAAGGCCGGCCTCTGCGGCAAGGTGCAGAAGGTGAACCCCCTGAAGGGCACGGTGGAGCTCCAC
CTGGAGGACGGGAAGACCTTGGAGGTTCCCAAGGAGGATCTGGCATGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(53-135)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB H7GIJ2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

35.249

100

0.361

Multiple sequence alignment