Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   PT798_RS05180 Genome accession   NZ_CP117979
Coordinates   1086883..1087557 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain B-41012     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1081883..1092557
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PT798_RS05155 - 1082098..1083165 (+) 1068 WP_000980137.1 membrane protein -
  PT798_RS05160 - 1083316..1084359 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  PT798_RS05165 - 1084688..1085116 (+) 429 WP_000198504.1 hypothetical protein -
  PT798_RS05170 - 1085325..1085831 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  PT798_RS05175 graX 1085944..1086867 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  PT798_RS05180 braR 1086883..1087557 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  PT798_RS05185 graS 1087550..1088590 (+) 1041 WP_001061247.1 histidine kinase GraS/ApsS -
  PT798_RS05190 vraF 1088734..1089495 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  PT798_RS05195 vraG 1089485..1091374 (+) 1890 WP_031589022.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=720077 PT798_RS05180 WP_001166500.1 1086883..1087557(+) (braR) [Staphylococcus aureus strain B-41012]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=720077 PT798_RS05180 WP_001166500.1 1086883..1087557(+) (braR) [Staphylococcus aureus strain B-41012]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397