Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   PT798_RS03585 Genome accession   NZ_CP117979
Coordinates   772167..773012 (+) Length   281 a.a.
NCBI ID   WP_001566903.1    Uniprot ID   -
Organism   Staphylococcus aureus strain B-41012     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 767167..778012
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PT798_RS03570 - 767433..769274 (-) 1842 WP_000077317.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  PT798_RS03575 metC 769243..770403 (-) 1161 WP_000175852.1 cystathionine beta-lyase MetC -
  PT798_RS03580 - 770400..771503 (-) 1104 WP_000655707.1 PLP-dependent transferase -
  PT798_RS03585 spo0J 772167..773012 (+) 846 WP_001566903.1 ParB/RepB/Spo0J family partition protein Regulator
  PT798_RS03590 - 773169..774050 (+) 882 WP_001077602.1 mechanosensitive ion channel family protein -
  PT798_RS03595 - 774080..774283 (+) 204 WP_000157345.1 DUF951 domain-containing protein -
  PT798_RS03600 ychF 774295..775392 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  PT798_RS03605 - 775478..775669 (-) 192 WP_001052483.1 hypothetical protein -
  PT798_RS03610 rpsF 775913..776209 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  PT798_RS03615 ssbA 776230..776733 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  PT798_RS03620 rpsR 776785..777027 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32869.88 Da        Isoelectric Point: 10.0091

>NTDB_id=720069 PT798_RS03585 WP_001566903.1 772167..773012(+) (spo0J) [Staphylococcus aureus strain B-41012]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGTKVDISIKKSVGKISFEFDSQEDFLRIIEQLNRRYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=720069 PT798_RS03585 WP_001566903.1 772167..773012(+) (spo0J) [Staphylococcus aureus strain B-41012]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGAATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTGCCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGTACCAAAGTAGATATATCAATAAAAAAATCGGTTGGTAAAATCTCATTTGAGTTTGATTCACAAGAAGA
TTTTCTAAGAATAATTGAACAATTAAATCGTAGGTATGGTAAATAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(161-210)

ParB/Sulfiredoxin domain (ParB_N)

(22-109)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.379

92.883

0.384