Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   PT798_RS02000 Genome accession   NZ_CP117979
Coordinates   423891..424691 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain B-41012     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 418891..429691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PT798_RS01985 walK 419553..421379 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  PT798_RS01990 yycH 421372..422706 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  PT798_RS01995 yycI 422707..423495 (+) 789 WP_001104166.1 two-component system regulatory protein YycI -
  PT798_RS02000 vicX 423891..424691 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  PT798_RS02005 adsA 424918..427236 (+) 2319 WP_000645770.1 LPXTG-anchored adenosine synthase AdsA -
  PT798_RS02010 rlmH 427604..428083 (+) 480 WP_031588515.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PT798_RS02015 - 428675..429064 (+) 390 WP_049948298.1 DUF6339 family protein -
  PT798_RS02020 - 429162..429437 (+) 276 WP_224681092.1 DUF2975 domain-containing protein -
  PT798_RS02025 - 429448..429651 (+) 204 WP_209307420.1 helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=720068 PT798_RS02000 WP_000088649.1 423891..424691(+) (vicX) [Staphylococcus aureus strain B-41012]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=720068 PT798_RS02000 WP_000088649.1 423891..424691(+) (vicX) [Staphylococcus aureus strain B-41012]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGTGATATGGGACATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474