Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | JMH49_RS08325 | Genome accession | NZ_AP024270 |
| Coordinates | 1574847..1575314 (-) | Length | 155 a.a. |
| NCBI ID | WP_011173597.1 | Uniprot ID | Q72IE6 |
| Organism | Thermus thermophilus strain HB5018 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1569847..1580314
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMH49_RS08300 (TthHB5018_16460) | - | 1570043..1570456 (+) | 414 | WP_201350882.1 | PaaI family thioesterase | - |
| JMH49_RS08305 (TthHB5018_16470) | - | 1570430..1571392 (-) | 963 | WP_011228754.1 | dipeptidase | - |
| JMH49_RS08310 (TthHB5018_16480) | uvrC | 1571415..1573187 (+) | 1773 | WP_182223903.1 | excinuclease ABC subunit UvrC | - |
| JMH49_RS08315 (TthHB5018_16490) | - | 1573250..1574173 (-) | 924 | WP_011173595.1 | ribose-phosphate pyrophosphokinase | - |
| JMH49_RS08320 (TthHB5018_16500) | mtnN | 1574188..1574850 (-) | 663 | WP_201350883.1 | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase | - |
| JMH49_RS08325 (TthHB5018_16510) | luxS | 1574847..1575314 (-) | 468 | WP_011173597.1 | S-ribosylhomocysteine lyase | Regulator |
| JMH49_RS08330 (TthHB5018_16520) | guaA | 1575429..1576940 (+) | 1512 | WP_011228757.1 | glutamine-hydrolyzing GMP synthase | - |
| JMH49_RS08335 (TthHB5018_16530) | - | 1576940..1577503 (+) | 564 | WP_201350884.1 | Uma2 family endonuclease | - |
| JMH49_RS08340 (TthHB5018_16540) | - | 1577528..1577815 (+) | 288 | WP_011228759.1 | glutamine synthetase/cystathionine beta-lyase binding protein | - |
| JMH49_RS08345 (TthHB5018_16550) | - | 1577815..1578201 (+) | 387 | WP_011228760.1 | VOC family protein | - |
| JMH49_RS08350 (TthHB5018_16560) | rnhA | 1578198..1578698 (+) | 501 | WP_143591510.1 | ribonuclease HI | - |
Sequence
Protein
Download Length: 155 a.a. Molecular weight: 16823.34 Da Isoelectric Point: 6.7534
>NTDB_id=72003 JMH49_RS08325 WP_011173597.1 1574847..1575314(-) (luxS) [Thermus thermophilus strain HB5018]
MAEVESFSLDHTKVKAPYVRLAGRKALAGGVVEKYDLRLAQPNREALPTGALHTLEHLLAGYLRDHLPGVIDLSPMGCRT
GFYLVVEGPVGEEKVLEAFAQALKDVLAHEGEVPGASFRECGNYRDHDLPGAKAWAEKVLKAGLRVQATVPLEAR
MAEVESFSLDHTKVKAPYVRLAGRKALAGGVVEKYDLRLAQPNREALPTGALHTLEHLLAGYLRDHLPGVIDLSPMGCRT
GFYLVVEGPVGEEKVLEAFAQALKDVLAHEGEVPGASFRECGNYRDHDLPGAKAWAEKVLKAGLRVQATVPLEAR
Nucleotide
Download Length: 468 bp
>NTDB_id=72003 JMH49_RS08325 WP_011173597.1 1574847..1575314(-) (luxS) [Thermus thermophilus strain HB5018]
ATGGCCGAGGTGGAGAGCTTCAGCCTGGACCACACCAAGGTCAAGGCCCCCTACGTGCGCCTGGCGGGGAGGAAGGCCCT
CGCGGGGGGCGTGGTGGAGAAGTACGACCTGAGGCTTGCCCAGCCCAACCGGGAGGCCCTGCCCACGGGGGCCTTGCACA
CCCTGGAGCACCTCCTCGCAGGGTATTTGCGGGACCACCTCCCGGGGGTCATTGACCTCTCCCCCATGGGCTGCCGCACG
GGGTTTTACCTGGTGGTGGAAGGCCCCGTGGGGGAGGAAAAGGTCCTCGAGGCCTTCGCCCAGGCCTTGAAGGACGTCCT
CGCCCACGAGGGGGAGGTCCCCGGGGCGAGCTTCAGGGAGTGCGGCAACTACCGGGACCATGACCTTCCTGGCGCCAAGG
CCTGGGCGGAGAAGGTGCTAAAGGCGGGGCTTAGGGTCCAGGCCACCGTTCCCCTGGAGGCGAGGTGA
ATGGCCGAGGTGGAGAGCTTCAGCCTGGACCACACCAAGGTCAAGGCCCCCTACGTGCGCCTGGCGGGGAGGAAGGCCCT
CGCGGGGGGCGTGGTGGAGAAGTACGACCTGAGGCTTGCCCAGCCCAACCGGGAGGCCCTGCCCACGGGGGCCTTGCACA
CCCTGGAGCACCTCCTCGCAGGGTATTTGCGGGACCACCTCCCGGGGGTCATTGACCTCTCCCCCATGGGCTGCCGCACG
GGGTTTTACCTGGTGGTGGAAGGCCCCGTGGGGGAGGAAAAGGTCCTCGAGGCCTTCGCCCAGGCCTTGAAGGACGTCCT
CGCCCACGAGGGGGAGGTCCCCGGGGCGAGCTTCAGGGAGTGCGGCAACTACCGGGACCATGACCTTCCTGGCGCCAAGG
CCTGGGCGGAGAAGGTGCTAAAGGCGGGGCTTAGGGTCCAGGCCACCGTTCCCCTGGAGGCGAGGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
41.558 |
99.355 |
0.413 |