Detailed information NTG0719703

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PT284_RS20800
• Genome accession: NZ_CP117959
• Coordinates: 4126258..4127283 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain B-2207
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4121258..4132283

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PT284_RS20770	zapB	4121342..4121587 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
PT284_RS20775	rraA	4121672..4122157 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PT284_RS20780	menA	4122250..4123176 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PT284_RS20785	hslU	4123243..4124574 (-)	1332	WP_078046129.1	HslU--HslV peptidase ATPase subunit	-
PT284_RS20790	hslV	4124584..4125114 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PT284_RS20795	ftsN	4125207..4126166 (-)	960	WP_000068828.1	cell division protein FtsN	-
PT284_RS20800	cytR	4126258..4127283 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PT284_RS20805	priA	4127439..4129637 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
PT284_RS20810	rpmE	4129840..4130052 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
PT284_RS20815	yiiX	4130113..4130721 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
PT284_RS20820	metJ	4130905..4131222 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=719703 PT284_RS20800 WP_000644904.1 4126258..4127283(-) (cytR) [Escherichia coli strain B-2207]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=719703 PT284_RS20800 WP_000644904.1 4126258..4127283(-) (cytR) [Escherichia coli strain B-2207]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628