Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   NWT85_RS16740 Genome accession   NZ_CP102869
Coordinates   3354079..3354675 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain KA2     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3349079..3359675
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NWT85_RS16725 (NWT85_16725) helD 3349287..3351341 (-) 2055 WP_004179218.1 DNA helicase IV -
  NWT85_RS16730 (NWT85_16730) - 3351466..3351912 (+) 447 WP_002898425.1 YccF domain-containing protein -
  NWT85_RS16735 (NWT85_16735) yccS 3351930..3354065 (+) 2136 WP_032434245.1 YccS family putative transporter -
  NWT85_RS16740 (NWT85_16740) sxy/tfoX 3354079..3354675 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  NWT85_RS16745 (NWT85_16745) sulA 3355024..3355533 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  NWT85_RS16750 (NWT85_16750) ompA 3355886..3356956 (+) 1071 WP_002898408.1 porin OmpA -
  NWT85_RS16755 (NWT85_16755) matP 3357088..3357540 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  NWT85_RS16760 (NWT85_16760) - 3357726..3359483 (+) 1758 WP_032434243.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=719474 NWT85_RS16740 WP_004179217.1 3354079..3354675(-) (sxy/tfoX) [Klebsiella pneumoniae strain KA2]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=719474 NWT85_RS16740 WP_004179217.1 3354079..3354675(-) (sxy/tfoX) [Klebsiella pneumoniae strain KA2]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAAAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51