Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NWE25_RS06925 Genome accession   NZ_CP102866
Coordinates   1389821..1390285 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain YS-AT-DS1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1384821..1395285
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NWE25_RS06905 (NWE25_06905) - 1385302..1387122 (+) 1821 WP_007409606.1 PAS domain-containing protein -
  NWE25_RS06910 (NWE25_06910) - 1387103..1388316 (-) 1214 Protein_1308 aminotransferase A -
  NWE25_RS06915 (NWE25_06915) - 1388517..1388678 (-) 162 WP_007409608.1 hypothetical protein -
  NWE25_RS06920 (NWE25_06920) cheV 1388867..1389778 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  NWE25_RS06925 (NWE25_06925) kre 1389821..1390285 (-) 465 WP_003154622.1 YkyB family protein Regulator
  NWE25_RS06930 (NWE25_06930) - 1390408..1391700 (-) 1293 WP_015239757.1 MFS transporter -
  NWE25_RS06935 (NWE25_06935) - 1391776..1392270 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  NWE25_RS06940 (NWE25_06940) - 1392345..1393208 (-) 864 WP_015239758.1 metallophosphoesterase -
  NWE25_RS06945 (NWE25_06945) fadH 1393353..1394117 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  NWE25_RS06950 (NWE25_06950) - 1394231..1394779 (+) 549 WP_258334757.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=719412 NWE25_RS06925 WP_003154622.1 1389821..1390285(-) (kre) [Bacillus velezensis strain YS-AT-DS1]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=719412 NWE25_RS06925 WP_003154622.1 1389821..1390285(-) (kre) [Bacillus velezensis strain YS-AT-DS1]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929