Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NV349_RS21060 Genome accession   NZ_CP102798
Coordinates   4300408..4301358 (-) Length   316 a.a.
NCBI ID   WP_036128401.1    Uniprot ID   A0A0W7Y7I7
Organism   Lysinibacillus sp. OF-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4295408..4306358
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NV349_RS21035 (NV349_21040) - 4296665..4297204 (+) 540 WP_036128391.1 hypothetical protein -
  NV349_RS21040 (NV349_21045) - 4297296..4297610 (-) 315 WP_036128393.1 antibiotic biosynthesis monooxygenase -
  NV349_RS21045 (NV349_21050) - 4297612..4298637 (-) 1026 WP_036128395.1 siderophore ABC transporter substrate-binding protein -
  NV349_RS21050 (NV349_21055) - 4298704..4299465 (-) 762 WP_036128397.1 ABC transporter ATP-binding protein -
  NV349_RS21055 (NV349_21060) - 4299462..4300415 (-) 954 WP_271911166.1 iron chelate uptake ABC transporter family permease subunit -
  NV349_RS21060 (NV349_21065) ceuB 4300408..4301358 (-) 951 WP_036128401.1 ABC transporter permease Machinery gene
  NV349_RS21065 (NV349_21070) - 4301644..4302696 (-) 1053 WP_271911168.1 hypothetical protein -
  NV349_RS21070 (NV349_21075) menC 4302739..4303845 (-) 1107 WP_271911170.1 o-succinylbenzoate synthase -
  NV349_RS21075 (NV349_21080) - 4303867..4304691 (-) 825 WP_058844744.1 GNAT family N-acetyltransferase -
  NV349_RS21080 (NV349_21085) - 4304691..4305836 (-) 1146 WP_036128409.1 M20 peptidase aminoacylase family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34826.02 Da        Isoelectric Point: 10.1462

>NTDB_id=719092 NV349_RS21060 WP_036128401.1 4300408..4301358(-) (ceuB) [Lysinibacillus sp. OF-1]
MKIRYLLTATIVLSIVSLFIGVIDIKPSDLLDFQSEEARLFLISRVPRLVAILLAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDATRLGVLISMMFFTNVTYFQKISFAFIFALAGTLLFMQILNRIKFKDAIFIPLIGLMYGNILSSVTTFFAYKANII
QNISAWLQGDFSLIMKGRYELLYISVPVLILAYIYANRFTVAGMGEDFAKNLGLSYKFVVNLGLVLVALISTTVVLTVGV
IPFLGLIIPNIISLFKGDNLAKTLPHTALLGMSFLLFCDILGRVLIFPYEIPISMTVGVIGSAIFLFMLFRGRAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=719092 NV349_RS21060 WP_036128401.1 4300408..4301358(-) (ceuB) [Lysinibacillus sp. OF-1]
ATGAAAATAAGATATCTTTTAACAGCAACGATTGTGCTGTCTATTGTGTCGCTATTTATCGGAGTAATAGATATTAAGCC
TAGCGACCTATTAGACTTTCAATCAGAAGAAGCTAGACTATTTTTAATTAGTCGTGTACCTAGACTTGTTGCTATTTTGC
TAGCAGGTGCAGGTATGAGTATTGCTGGTTTAATTATGCAAAGCTTAAGTAGGAATAAGTTCGTATCGCCAACAACAGCT
GGTACATTAGATGCCACGCGGTTGGGTGTATTGATTTCCATGATGTTCTTTACGAATGTCACGTATTTTCAAAAAATTTC
CTTCGCTTTCATATTTGCTTTAGCCGGCACATTACTATTTATGCAAATATTAAACCGAATTAAGTTTAAAGATGCGATTT
TTATACCGCTTATTGGCTTAATGTATGGAAATATTTTGTCCTCCGTTACAACATTCTTTGCGTACAAGGCGAATATTATC
CAGAACATTTCTGCATGGTTACAAGGAGATTTCTCATTAATCATGAAAGGCCGTTATGAACTGTTATACATAAGTGTGCC
AGTACTTATTTTAGCTTACATTTACGCAAATCGTTTTACTGTAGCTGGGATGGGTGAGGATTTTGCAAAAAACCTTGGTC
TATCCTATAAATTTGTGGTGAATTTAGGCTTAGTGTTGGTAGCCCTTATTTCCACAACAGTGGTGTTAACAGTCGGTGTC
ATTCCTTTCCTTGGTTTGATTATTCCAAACATAATTTCACTGTTTAAAGGTGATAATTTGGCAAAAACCTTGCCACATAC
AGCATTACTTGGTATGTCATTTTTATTATTCTGCGATATTTTGGGACGTGTACTGATTTTCCCTTATGAAATACCAATTA
GTATGACTGTTGGTGTAATTGGAAGTGCCATCTTCCTATTCATGTTGTTTAGGGGGAGAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0W7Y7I7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528