Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   NWO26_RS07225 Genome accession   NZ_CP102797
Coordinates   1406979..1407746 (+) Length   255 a.a.
NCBI ID   WP_113870460.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ST057-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1401979..1412746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NWO26_RS07210 - 1404293..1404976 (-) 684 WP_011226711.1 YoaK family protein -
  NWO26_RS07215 rlmH 1404992..1405471 (-) 480 WP_011681766.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NWO26_RS07220 - 1405676..1406913 (+) 1238 Protein_1421 S1C family serine protease -
  NWO26_RS07225 spo0J 1406979..1407746 (+) 768 WP_113870460.1 ParB/RepB/Spo0J family partition protein Regulator
  NWO26_RS07230 dnaA 1407985..1409349 (+) 1365 WP_002948584.1 chromosomal replication initiator protein DnaA -
  NWO26_RS07235 dnaN 1409504..1410640 (+) 1137 WP_011680575.1 DNA polymerase III subunit beta -
  NWO26_RS07240 - 1410716..1411964 (-) 1249 Protein_1425 ISL3 family transposase -
  NWO26_RS07245 - 1412109..1412300 (+) 192 WP_002886272.1 DUF951 domain-containing protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29433.78 Da        Isoelectric Point: 9.4740

>NTDB_id=719038 NWO26_RS07225 WP_113870460.1 1406979..1407746(+) (spo0J) [Streptococcus thermophilus strain ST057-1]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIVVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNVLRLLQLPREIQTSIENGSLSQG
HARALLAIEDSQKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=719038 NWO26_RS07225 WP_113870460.1 1406979..1407746(+) (spo0J) [Streptococcus thermophilus strain ST057-1]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTGTTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGTTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCAAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCTATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.471

100

0.565