Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | PTC91_RS23715 | Genome accession | NZ_CP117749 |
| Coordinates | 4990236..4993085 (+) | Length | 949 a.a. |
| NCBI ID | WP_034021421.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain 2022CK-00828 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4985236..4998085
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTC91_RS23680 (PTC91_23680) | - | 4985909..4986340 (+) | 432 | WP_170288398.1 | hypothetical protein | - |
| PTC91_RS23685 (PTC91_23685) | - | 4986510..4987418 (+) | 909 | WP_023093167.1 | LysR family transcriptional regulator | - |
| PTC91_RS23690 (PTC91_23690) | - | 4987427..4987987 (-) | 561 | Protein_4692 | LysR family transcriptional regulator | - |
| PTC91_RS23695 (PTC91_23695) | - | 4988127..4988595 (+) | 469 | Protein_4693 | IS66 family transposase | - |
| PTC91_RS23700 (PTC91_23700) | - | 4988594..4988971 (-) | 378 | WP_219800265.1 | hypothetical protein | - |
| PTC91_RS23705 (PTC91_23705) | - | 4989256..4989537 (+) | 282 | WP_012761384.1 | helix-turn-helix domain-containing protein | - |
| PTC91_RS23710 (PTC91_23710) | - | 4989573..4990142 (+) | 570 | WP_024973321.1 | Hsp20/alpha crystallin family protein | - |
| PTC91_RS23715 (PTC91_23715) | clpC | 4990236..4993085 (+) | 2850 | WP_034021421.1 | heat shock survival AAA family ATPase ClpK | Regulator |
| PTC91_RS23720 (PTC91_23720) | cls | 4993103..4994533 (+) | 1431 | WP_033986170.1 | cardiolipin synthase | - |
| PTC91_RS23725 (PTC91_23725) | ftsH | 4994561..4996441 (+) | 1881 | WP_033986169.1 | ATP-dependent zinc metalloprotease FtsH | - |
| PTC91_RS23730 (PTC91_23730) | trx-GI | 4996438..4996878 (+) | 441 | WP_031755011.1 | heat resistance system thioredoxin Trx-GI | - |
Sequence
Protein
Download Length: 949 a.a. Molecular weight: 104537.50 Da Isoelectric Point: 5.8104
>NTDB_id=718952 PTC91_RS23715 WP_034021421.1 4990236..4993085(+) (clpC) [Pseudomonas aeruginosa strain 2022CK-00828]
MARKQCQVCGQPATVRVEANLNGRHSTMLLCDDHYRQLVRQQKRTVSPLEALFGSRSGLFEDFLGSDFFRIGDDAPSMAA
DTDEVVDASFGEPAPAGTGTARRRGSGLASRISEQSEALLQEAARHAAEFGRAEVDTEHLLLALSDSDVVKTILGQFKIK
VDDLKRQIESEAKRGDKPFEGEIGVSPRVKDALSRAFVASNELGHSYVGPEHFLIGLAEEGEGLAANLLRRYGLTPQALR
QQVSKVVGKGAEDGRAETPTNTPELDKYSRDLTKMAREGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIV
EGLAQRMVAGEVPETLRDKRLVELNINAMVAGAKYRGEFEERVQKVLKEVTEHQGELILFIDEVHTIVGAGQGGGEGGLD
VANVFKPMMARGELNLIGATTLNEYQKYIEKDAALERRFQPVMVPEPTVAQTMMILRGLRDTFEAHHKVSITEDAIIAAA
ELSDRYITARFLPDKAIDLLDQAAARVKLSATARPVAVQELESELHQLRREQDYVASRKQYDKAAELGKRIEAKETELKK
LVEEWERERASGSAEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGS
KPVATFLFLGPTGVGKTELAKALAESIYGDEGALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLL
LDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKARGAAGEEYEKTKSEVMDVLRGHFR
PEFLNRIDEIIVFHALGKEEIRHIVGLQLDRVARNAASQGVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSELETALA
REMLGGGIGKADHASARWDDKAERVVFERQEPPAKPAEPEKPDAANVAETPPSDASKPARKKKSAGGES
MARKQCQVCGQPATVRVEANLNGRHSTMLLCDDHYRQLVRQQKRTVSPLEALFGSRSGLFEDFLGSDFFRIGDDAPSMAA
DTDEVVDASFGEPAPAGTGTARRRGSGLASRISEQSEALLQEAARHAAEFGRAEVDTEHLLLALSDSDVVKTILGQFKIK
VDDLKRQIESEAKRGDKPFEGEIGVSPRVKDALSRAFVASNELGHSYVGPEHFLIGLAEEGEGLAANLLRRYGLTPQALR
QQVSKVVGKGAEDGRAETPTNTPELDKYSRDLTKMAREGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIV
EGLAQRMVAGEVPETLRDKRLVELNINAMVAGAKYRGEFEERVQKVLKEVTEHQGELILFIDEVHTIVGAGQGGGEGGLD
VANVFKPMMARGELNLIGATTLNEYQKYIEKDAALERRFQPVMVPEPTVAQTMMILRGLRDTFEAHHKVSITEDAIIAAA
ELSDRYITARFLPDKAIDLLDQAAARVKLSATARPVAVQELESELHQLRREQDYVASRKQYDKAAELGKRIEAKETELKK
LVEEWERERASGSAEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGS
KPVATFLFLGPTGVGKTELAKALAESIYGDEGALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLL
LDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKARGAAGEEYEKTKSEVMDVLRGHFR
PEFLNRIDEIIVFHALGKEEIRHIVGLQLDRVARNAASQGVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSELETALA
REMLGGGIGKADHASARWDDKAERVVFERQEPPAKPAEPEKPDAANVAETPPSDASKPARKKKSAGGES
Nucleotide
Download Length: 2850 bp
>NTDB_id=718952 PTC91_RS23715 WP_034021421.1 4990236..4993085(+) (clpC) [Pseudomonas aeruginosa strain 2022CK-00828]
ATGGCCAGAAAACAATGCCAAGTCTGCGGCCAGCCCGCCACGGTGCGGGTGGAAGCCAATCTCAATGGTCGCCACAGCAC
CATGCTGTTGTGTGACGATCACTATCGCCAACTGGTGCGCCAGCAAAAGCGCACCGTCTCACCGCTGGAAGCCTTGTTCG
GCTCGCGCAGCGGGCTGTTCGAAGACTTCCTTGGCAGCGACTTCTTCCGCATCGGTGACGACGCACCGTCCATGGCGGCC
GATACCGACGAGGTCGTCGATGCCTCGTTCGGCGAACCCGCCCCGGCCGGTACGGGCACCGCGCGCCGTCGCGGCAGTGG
GCTCGCCAGCCGTATCAGCGAACAGTCCGAGGCCCTATTGCAGGAGGCCGCCCGACACGCTGCAGAGTTCGGGCGCGCCG
AAGTCGATACCGAACACCTGCTGCTGGCGCTATCCGACAGCGACGTGGTCAAGACCATCCTGGGGCAGTTCAAGATCAAG
GTCGATGACCTCAAGCGCCAGATCGAATCCGAAGCCAAGCGCGGCGATAAGCCGTTCGAGGGCGAGATCGGCGTGTCGCC
CCGGGTCAAGGACGCGCTCAGCCGTGCTTTCGTGGCCTCCAACGAACTCGGCCACTCTTATGTCGGGCCGGAGCATTTCC
TGATCGGGCTCGCCGAGGAAGGCGAAGGTTTGGCGGCCAACCTGCTGCGCCGTTACGGCCTCACGCCGCAAGCGCTGCGC
CAGCAGGTAAGCAAGGTGGTCGGCAAAGGGGCCGAGGATGGCCGCGCCGAGACGCCGACCAACACGCCCGAGCTGGATAA
ATACTCGCGCGACCTCACCAAGATGGCGCGCGAGGGCAAACTCGATCCAGTCATCGGCCGTGCGCAGGAGATCGAGACCA
CCATCGAGGTGCTGGCCCGGCGCAAGAAAAACAACCCGGTGTTGATCGGTGAGCCCGGCGTCGGCAAGACCGCCATTGTC
GAAGGACTGGCGCAGCGGATGGTCGCCGGCGAAGTGCCCGAGACGCTGCGCGACAAGCGTCTGGTCGAACTCAACATCAA
CGCCATGGTGGCAGGCGCCAAGTACCGCGGCGAGTTCGAGGAGCGCGTGCAGAAGGTGCTCAAGGAAGTGACCGAGCACC
AGGGCGAGCTGATTCTCTTCATCGACGAGGTGCACACCATCGTCGGTGCAGGCCAGGGTGGCGGCGAAGGCGGGCTGGAC
GTGGCCAACGTGTTCAAGCCGATGATGGCGCGCGGCGAACTGAACCTGATCGGCGCCACCACGCTCAACGAGTATCAGAA
GTACATCGAGAAGGACGCCGCGCTGGAGCGTCGCTTCCAGCCGGTGATGGTGCCCGAGCCGACGGTAGCGCAGACCATGA
TGATCCTGCGCGGCTTGCGCGACACCTTCGAGGCGCACCACAAGGTCAGCATCACCGAGGATGCGATCATCGCCGCCGCC
GAGTTGTCGGACCGCTACATCACCGCGCGCTTTTTGCCTGACAAGGCCATCGACCTGCTCGACCAGGCGGCCGCACGCGT
GAAGCTGTCGGCCACGGCCCGCCCGGTGGCGGTGCAAGAGCTGGAGTCCGAACTGCACCAGCTGCGGCGTGAGCAGGACT
ATGTGGCCTCGCGCAAGCAGTACGACAAGGCCGCCGAGCTGGGCAAGCGCATCGAGGCCAAGGAGACTGAACTCAAGAAG
CTCGTCGAGGAATGGGAACGCGAGCGCGCCTCGGGCAGCGCCGAAGTCAAAGCCGAGCATGTCGCGCAGATCGTCTCGCG
CCTGACCGGCATTCCGGTCAACGAGCTGACGGTGGAAGAACGCGAGAAGCTGCTGCATCTGGAGCAGCGGCTGCACGAGC
GCCTGGTGGGCCAGGACGAAGCGGTGCGCGCGGTGGCCGATGCCGTGCGGTTGTCGCGCGCGGGCCTGCGCGAAGGCAGC
AAGCCGGTGGCGACTTTTCTGTTCCTCGGGCCGACCGGCGTGGGCAAGACCGAGCTCGCCAAGGCGCTGGCCGAGTCCAT
CTATGGCGATGAAGGTGCGCTGCTGCGCATCGACATGTCCGAGTACGGGGAACGCCATACCGTGGCACGCCTGGTGGGCG
CGCCTCCGGGTTATGTGGGCTATGACGAGGGCGGCCAGCTCACCGAGAAGGTGCGTCGCAAGCCCTACAGCGTGTTGCTG
CTGGACGAGATCGAGAAGGCTCACCCCGACGTCTACAACATCCTGCTGCAGGTGTTCGACGACGGGCGGCTCACCGACGG
CAAGGGCCGGGTGGTGGATTTCACCAATACCATCATCATCGCCACCTCGAACTTGGGCTCGGACATCATCCAGCGTCGGC
TGAAGGCCCGTGGCGCCGCCGGCGAGGAATACGAGAAGACCAAGTCCGAGGTGATGGACGTGCTGCGCGGACACTTCCGC
CCCGAGTTCCTCAACCGCATCGACGAGATCATCGTCTTCCATGCGCTGGGCAAGGAGGAGATCCGCCATATCGTCGGCCT
GCAGCTCGATCGTGTGGCCCGCAACGCCGCCAGCCAGGGCGTGACGCTGACCTTCGATCAGACCTTGATCGATCACTTCG
CGGAGGAAGGCTACAAGCCCGAGTTCGGCGCGCGTGAGCTCAAGCGGCTGATCCGCAGCGAGCTGGAAACTGCTCTGGCG
CGCGAGATGCTGGGTGGCGGTATCGGCAAGGCCGATCACGCCAGCGCCCGCTGGGACGACAAGGCCGAACGGGTGGTCTT
CGAGCGCCAGGAGCCACCCGCGAAGCCGGCCGAGCCTGAGAAGCCCGATGCCGCGAACGTGGCCGAGACGCCGCCGAGCG
ACGCGAGCAAGCCTGCGCGCAAGAAGAAGTCAGCGGGCGGCGAATCTTGA
ATGGCCAGAAAACAATGCCAAGTCTGCGGCCAGCCCGCCACGGTGCGGGTGGAAGCCAATCTCAATGGTCGCCACAGCAC
CATGCTGTTGTGTGACGATCACTATCGCCAACTGGTGCGCCAGCAAAAGCGCACCGTCTCACCGCTGGAAGCCTTGTTCG
GCTCGCGCAGCGGGCTGTTCGAAGACTTCCTTGGCAGCGACTTCTTCCGCATCGGTGACGACGCACCGTCCATGGCGGCC
GATACCGACGAGGTCGTCGATGCCTCGTTCGGCGAACCCGCCCCGGCCGGTACGGGCACCGCGCGCCGTCGCGGCAGTGG
GCTCGCCAGCCGTATCAGCGAACAGTCCGAGGCCCTATTGCAGGAGGCCGCCCGACACGCTGCAGAGTTCGGGCGCGCCG
AAGTCGATACCGAACACCTGCTGCTGGCGCTATCCGACAGCGACGTGGTCAAGACCATCCTGGGGCAGTTCAAGATCAAG
GTCGATGACCTCAAGCGCCAGATCGAATCCGAAGCCAAGCGCGGCGATAAGCCGTTCGAGGGCGAGATCGGCGTGTCGCC
CCGGGTCAAGGACGCGCTCAGCCGTGCTTTCGTGGCCTCCAACGAACTCGGCCACTCTTATGTCGGGCCGGAGCATTTCC
TGATCGGGCTCGCCGAGGAAGGCGAAGGTTTGGCGGCCAACCTGCTGCGCCGTTACGGCCTCACGCCGCAAGCGCTGCGC
CAGCAGGTAAGCAAGGTGGTCGGCAAAGGGGCCGAGGATGGCCGCGCCGAGACGCCGACCAACACGCCCGAGCTGGATAA
ATACTCGCGCGACCTCACCAAGATGGCGCGCGAGGGCAAACTCGATCCAGTCATCGGCCGTGCGCAGGAGATCGAGACCA
CCATCGAGGTGCTGGCCCGGCGCAAGAAAAACAACCCGGTGTTGATCGGTGAGCCCGGCGTCGGCAAGACCGCCATTGTC
GAAGGACTGGCGCAGCGGATGGTCGCCGGCGAAGTGCCCGAGACGCTGCGCGACAAGCGTCTGGTCGAACTCAACATCAA
CGCCATGGTGGCAGGCGCCAAGTACCGCGGCGAGTTCGAGGAGCGCGTGCAGAAGGTGCTCAAGGAAGTGACCGAGCACC
AGGGCGAGCTGATTCTCTTCATCGACGAGGTGCACACCATCGTCGGTGCAGGCCAGGGTGGCGGCGAAGGCGGGCTGGAC
GTGGCCAACGTGTTCAAGCCGATGATGGCGCGCGGCGAACTGAACCTGATCGGCGCCACCACGCTCAACGAGTATCAGAA
GTACATCGAGAAGGACGCCGCGCTGGAGCGTCGCTTCCAGCCGGTGATGGTGCCCGAGCCGACGGTAGCGCAGACCATGA
TGATCCTGCGCGGCTTGCGCGACACCTTCGAGGCGCACCACAAGGTCAGCATCACCGAGGATGCGATCATCGCCGCCGCC
GAGTTGTCGGACCGCTACATCACCGCGCGCTTTTTGCCTGACAAGGCCATCGACCTGCTCGACCAGGCGGCCGCACGCGT
GAAGCTGTCGGCCACGGCCCGCCCGGTGGCGGTGCAAGAGCTGGAGTCCGAACTGCACCAGCTGCGGCGTGAGCAGGACT
ATGTGGCCTCGCGCAAGCAGTACGACAAGGCCGCCGAGCTGGGCAAGCGCATCGAGGCCAAGGAGACTGAACTCAAGAAG
CTCGTCGAGGAATGGGAACGCGAGCGCGCCTCGGGCAGCGCCGAAGTCAAAGCCGAGCATGTCGCGCAGATCGTCTCGCG
CCTGACCGGCATTCCGGTCAACGAGCTGACGGTGGAAGAACGCGAGAAGCTGCTGCATCTGGAGCAGCGGCTGCACGAGC
GCCTGGTGGGCCAGGACGAAGCGGTGCGCGCGGTGGCCGATGCCGTGCGGTTGTCGCGCGCGGGCCTGCGCGAAGGCAGC
AAGCCGGTGGCGACTTTTCTGTTCCTCGGGCCGACCGGCGTGGGCAAGACCGAGCTCGCCAAGGCGCTGGCCGAGTCCAT
CTATGGCGATGAAGGTGCGCTGCTGCGCATCGACATGTCCGAGTACGGGGAACGCCATACCGTGGCACGCCTGGTGGGCG
CGCCTCCGGGTTATGTGGGCTATGACGAGGGCGGCCAGCTCACCGAGAAGGTGCGTCGCAAGCCCTACAGCGTGTTGCTG
CTGGACGAGATCGAGAAGGCTCACCCCGACGTCTACAACATCCTGCTGCAGGTGTTCGACGACGGGCGGCTCACCGACGG
CAAGGGCCGGGTGGTGGATTTCACCAATACCATCATCATCGCCACCTCGAACTTGGGCTCGGACATCATCCAGCGTCGGC
TGAAGGCCCGTGGCGCCGCCGGCGAGGAATACGAGAAGACCAAGTCCGAGGTGATGGACGTGCTGCGCGGACACTTCCGC
CCCGAGTTCCTCAACCGCATCGACGAGATCATCGTCTTCCATGCGCTGGGCAAGGAGGAGATCCGCCATATCGTCGGCCT
GCAGCTCGATCGTGTGGCCCGCAACGCCGCCAGCCAGGGCGTGACGCTGACCTTCGATCAGACCTTGATCGATCACTTCG
CGGAGGAAGGCTACAAGCCCGAGTTCGGCGCGCGTGAGCTCAAGCGGCTGATCCGCAGCGAGCTGGAAACTGCTCTGGCG
CGCGAGATGCTGGGTGGCGGTATCGGCAAGGCCGATCACGCCAGCGCCCGCTGGGACGACAAGGCCGAACGGGTGGTCTT
CGAGCGCCAGGAGCCACCCGCGAAGCCGGCCGAGCCTGAGAAGCCCGATGCCGCGAACGTGGCCGAGACGCCGCCGAGCG
ACGCGAGCAAGCCTGCGCGCAAGAAGAAGTCAGCGGGCGGCGAATCTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
50.818 |
83.772 |
0.426 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.59 |
86.301 |
0.376 |
| clpC | Streptococcus thermophilus LMD-9 |
41.869 |
86.828 |
0.364 |
| clpC | Streptococcus mutans UA159 |
42.086 |
85.88 |
0.361 |
| clpC | Streptococcus thermophilus LMG 18311 |
41.778 |
86.512 |
0.361 |
| clpC | Streptococcus pneumoniae D39 |
42.118 |
85.564 |
0.36 |
| clpC | Streptococcus pneumoniae Rx1 |
42.118 |
85.564 |
0.36 |