Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NR984_RS16820 Genome accession   NZ_CP102663
Coordinates   3220366..3222672 (-) Length   768 a.a.
NCBI ID   WP_161658321.1    Uniprot ID   -
Organism   Bacillus sp. BAC     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3215366..3227672
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NR984_RS16780 (NR984_16780) - 3215828..3216259 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  NR984_RS16785 (NR984_16785) - 3216259..3216600 (+) 342 WP_003184836.1 Na(+)/H(+) antiporter subunit C -
  NR984_RS16790 (NR984_16790) - 3216593..3218071 (+) 1479 WP_003184838.1 Na+/H+ antiporter subunit D -
  NR984_RS16795 (NR984_16795) - 3218077..3218553 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  NR984_RS16800 (NR984_16800) - 3218553..3218837 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  NR984_RS16805 (NR984_16805) mnhG 3218821..3219195 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  NR984_RS16810 (NR984_16810) - 3219235..3219624 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  NR984_RS16815 (NR984_16815) comA 3219641..3220279 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  NR984_RS16820 (NR984_16820) comP 3220366..3222672 (-) 2307 WP_161658321.1 histidine kinase Regulator
  NR984_RS16825 (NR984_16825) comX 3222695..3222859 (-) 165 WP_003184853.1 competence pheromone ComX -
  NR984_RS16830 (NR984_16830) - 3222868..3223749 (-) 882 WP_003184856.1 polyprenyl synthetase family protein -
  NR984_RS16835 (NR984_16835) - 3224018..3225180 (+) 1163 WP_085959889.1 IS3 family transposase -
  NR984_RS16840 (NR984_16840) degQ 3225226..3225366 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  NR984_RS16845 (NR984_16845) - 3225852..3226199 (+) 348 WP_009329512.1 hypothetical protein -
  NR984_RS16850 (NR984_16850) - 3226242..3227462 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88417.75 Da        Isoelectric Point: 6.9880

>NTDB_id=718293 NR984_RS16820 WP_161658321.1 3220366..3222672(-) (comP) [Bacillus sp. BAC]
MKFSLKLVSVTLVVITCIYTFFVIYLCYNNMFVGAYLAYNSKNQLVVDYVEEDSLADYTGLKAGDIILEVNNEKPSKKEP
KNKILADVRSLSIERNGKIITTDTRDTIISYDVLFTVLIPVVFYLLCMFCVFLILKSNKTNKQMSSFLLISFLIIISLAY
VSVGGVSRGDKFSRYLNLLTFLSVPASYYHFILQYFKEIGKKFFSNKILLLYALPFLNIVLEIFYDLTDFLEEGRPYVNL
FSFFIGIVLVFGVIIYGLIKYKHSEEIYFLKMLMLGNFLGVFPFVVFFVLPILIIGDYIYSAAVVAPCLLIIPFSLVYQF
ISNKTYDVEFLVGRLKYYGLLAIIPTIMLISAFKLIKYQTGDYYDLRFTIYIYLVMLGVFYLKEILDYRFRLKRFSEKYN
YQDSIFKFTQTIRTHSSLNQVLLELKQTILDVLIVSQAHVLKVKSDGTISLLEEDAKEYPWIPYEQEVTKVITDIGKIVE
VDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLENVKKEGPNPAWLNKLMF
AIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKACTNQIRQRLINMNEQMSAVIQTTRETCQELRPQLLYDLG
LVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSRANEVLIMLVCIKEKVVLHYEDDGI
GVDPDKLYQNSASMELSGIRERVRALNGSLDIQTAEGKGFRVAIEMGL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=718293 NR984_RS16820 WP_161658321.1 3220366..3222672(-) (comP) [Bacillus sp. BAC]
ATGAAATTTTCATTGAAGTTAGTGTCAGTAACTCTTGTGGTGATTACCTGTATATATACTTTCTTTGTTATATATCTATG
TTATAACAACATGTTTGTAGGTGCATACTTAGCCTACAATTCGAAAAACCAGCTAGTTGTGGATTATGTTGAGGAAGATT
CCTTAGCCGATTATACGGGTTTAAAAGCTGGAGATATCATTCTTGAGGTTAATAATGAGAAGCCGTCTAAGAAGGAACCA
AAAAATAAAATTCTAGCAGATGTCCGTTCACTTTCTATTGAGAGAAATGGAAAAATCATTACAACTGATACAAGGGATAC
TATTATTAGTTATGATGTTTTATTTACTGTTTTAATCCCGGTTGTATTTTATTTATTATGCATGTTTTGTGTGTTTTTGA
TTTTAAAATCTAACAAGACGAATAAACAAATGTCTTCATTTTTGCTAATTTCATTTTTAATCATAATTTCACTGGCTTAT
GTAAGTGTCGGTGGAGTTTCAAGAGGTGATAAATTTAGCCGATATCTGAATTTGTTAACCTTTCTATCAGTACCTGCTAG
TTATTATCACTTTATACTTCAATATTTCAAAGAAATTGGCAAAAAATTCTTTAGCAATAAAATATTGTTGCTCTATGCTT
TACCTTTCTTGAATATCGTTTTAGAAATTTTTTATGACCTTACTGATTTTCTTGAGGAAGGTAGGCCATATGTCAATTTG
TTTTCGTTCTTTATAGGAATTGTTTTAGTTTTCGGAGTTATTATTTACGGTTTAATTAAATATAAGCATTCAGAGGAAAT
TTATTTCTTGAAAATGCTTATGTTAGGAAATTTCCTTGGTGTTTTTCCTTTTGTAGTATTCTTTGTTCTTCCAATTTTAA
TTATTGGGGATTATATTTATTCCGCCGCAGTAGTAGCTCCATGTCTATTGATCATTCCGTTTTCTTTAGTTTATCAATTC
ATATCTAATAAAACTTATGATGTGGAGTTTTTGGTTGGAAGATTAAAATACTATGGCCTATTGGCGATTATTCCAACAAT
TATGTTGATATCTGCTTTCAAGCTAATAAAGTATCAAACTGGGGACTACTATGATCTAAGATTCACAATCTATATCTACC
TGGTCATGCTCGGTGTTTTTTACCTTAAAGAAATCCTTGATTATCGCTTCCGTCTGAAACGTTTTTCAGAGAAGTATAAC
TACCAAGACAGTATATTTAAGTTCACACAAACGATTCGAACACACTCATCTTTAAATCAGGTTTTGTTGGAATTGAAACA
AACAATTCTTGATGTTTTGATTGTCAGCCAAGCCCATGTTCTGAAAGTCAAAAGCGACGGAACAATATCTTTGCTCGAAG
AAGATGCCAAAGAATATCCGTGGATCCCCTACGAACAAGAAGTAACCAAGGTGATCACCGACATCGGCAAAATCGTCGAA
GTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACGTCTTATGTCATGCTGTGTTTGTCGGTTTTAAATAC
GCCTAGGCTGACGCGCGATGAGATTTCATGGCTTGAGACGCTGGCGTTTTATACGAGCGTTTCCCTGGAAAACGTGCTGA
AAATCGGCGAGCTGATGGAGCATCTGGAAAATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTGAATAAATTGATGTTT
GCGATTGAAGAGAAGCAGAGATCTGATTTAGCCCGCGATCTCCACGACTCTGTCCTGCAGGATATGATTTCCTTGAAGCA
TCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGCCTGTACGAATCAAATCCGGCAAAGGCTCATCAATATGA
ATGAGCAAATGTCCGCCGTCATCCAGACGACAAGGGAAACGTGCCAAGAGCTGAGGCCGCAGCTGTTGTACGATCTCGGA
CTTGTCAAAGCCCTTTCGAAACTGGCGGCGCAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAATACGGAAAG
GTTCTCAAAGGTGCTCGACTTGGACACGCAGTTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATGCGGTTAAAC
ATTCGAGAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGATGACGGCATT
GGGGTTGACCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGAGCTGTCGGGCATTCGCGAGCGCGTCCGCGCACTGAA
CGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTTAGGGTCGCCATTGAAATGGGATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

51.675

100

0.522