Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   NR984_RS10210 Genome accession   NZ_CP102663
Coordinates   1984092..1984520 (+) Length   142 a.a.
NCBI ID   WP_003182220.1    Uniprot ID   A0A1Y0YFI7
Organism   Bacillus sp. BAC     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1979092..1989520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NR984_RS10180 (NR984_10180) - 1979275..1979883 (+) 609 WP_009328237.1 flavin reductase family protein -
  NR984_RS10185 (NR984_10185) wrbA 1980084..1980695 (+) 612 WP_003182210.1 NAD(P)H:quinone oxidoreductase -
  NR984_RS10190 (NR984_10190) - 1981016..1981156 (+) 141 WP_003182211.1 hypothetical protein -
  NR984_RS10195 (NR984_10195) - 1981149..1981982 (+) 834 WP_003182213.1 prohibitin family protein -
  NR984_RS10200 (NR984_10200) - 1982073..1982834 (+) 762 WP_003182215.1 hypothetical protein -
  NR984_RS10205 (NR984_10205) - 1982894..1983733 (+) 840 WP_003182218.1 thymidylate synthase -
  NR984_RS10210 (NR984_10210) nucA/comI 1984092..1984520 (+) 429 WP_003182220.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  NR984_RS10215 (NR984_10215) lexA 1984716..1985339 (-) 624 WP_003182222.1 transcriptional repressor LexA -
  NR984_RS10220 (NR984_10220) yneA 1985492..1985803 (+) 312 WP_161658308.1 cell division suppressor protein YneA -
  NR984_RS10225 (NR984_10225) - 1985822..1986469 (+) 648 WP_003182227.1 recombinase family protein -
  NR984_RS10230 (NR984_10230) - 1986535..1986768 (+) 234 WP_003182231.1 DUF896 domain-containing protein -
  NR984_RS10235 (NR984_10235) tkt 1986935..1988938 (+) 2004 WP_095240068.1 transketolase -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15332.29 Da        Isoelectric Point: 7.8987

>NTDB_id=718272 NR984_RS10210 WP_003182220.1 1984092..1984520(+) (nucA/comI) [Bacillus sp. BAC]
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDILYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSGFADGTRILFIVQ

Nucleotide


Download         Length: 429 bp        

>NTDB_id=718272 NR984_RS10210 WP_003182220.1 1984092..1984520(+) (nucA/comI) [Bacillus sp. BAC]
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTACTGCTTGGGCTTTCGGGAGGCGCCGCATATTCTCC
TCAGCATGCCGAAGGTGCTGCAAGGTATGACGACATATTGTATTTTCCGGCATCACGCTATCCCGAAACCGGCGCTCATA
TCAGCGACGCAATCAAAGCGGGGCATTCAGATGTCTGCACGATTGAAAGATCGGGAGCGGATAAGCGCCGCCAGGAATCA
CTGAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGCAAAGGAGC
GTCTGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGGTTTCGCCGACG
GGACGAGAATTTTGTTTATCGTTCAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(45-135)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0YFI7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

58.73

88.732

0.521