Detailed information NTG0718202

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: PSR65_RS07710
• Genome accession: NZ_CP117469
• Coordinates: 1603178..1604410 (-)
• Length: 410 a.a.
• NCBI ID: WP_001153640.1
• Uniprot ID: Q072Q7
• Organism: Escherichia coli strain B-ZidR
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1598178..1609410

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSR65_RS07690 (PSR65_07680)	-	1598818..1599515 (+)	698	WP_094096600.1	IS1-like element IS1A family transposase	-
PSR65_RS07695 (PSR65_07685)	-	1599627..1600217 (+)	591	WP_000405439.1	SDR family oxidoreductase	-
PSR65_RS07700 (PSR65_07690)	-	1600791..1601930 (+)	1140	WP_000069818.1	hypothetical protein	-
PSR65_RS07705 (PSR65_07695)	-	1601965..1602924 (+)	960	WP_000991482.1	hypothetical protein	-
PSR65_RS07710 (PSR65_07700)	kpsS	1603178..1604410 (-)	1233	WP_001153640.1	capsule biosynthesis protein	Regulator
PSR65_RS07715 (PSR65_07705)	-	1604445..1606472 (-)	2028	WP_000579244.1	capsular polysaccharide biosynthesis protein	-
PSR65_RS07720 (PSR65_07710)	kdsB	1606469..1607209 (-)	741	WP_000030740.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PSR65_RS07725 (PSR65_07715)	-	1607219..1608895 (-)	1677	WP_012767757.1	polysaccharide biosynthesis/export family protein	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 49050.74 Da
• Isoelectric Point: 10.0880

>NTDB_id=718202 PSR65_RS07710 WP_001153640.1 1603178..1604410(-) (kpsS) [Escherichia coli strain B-ZidR]
MQDNALTILLSGKKYLLLQGPMGPFFNDVAEWLESLDRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYKGHLHQFWQADFKPDMKLFKKFRGYLLVKTQVNGVYYGEMIFNKIKLD
KYFQSLSRQV

Nucleotide

• Length: 1233 bp

>NTDB_id=718202 PSR65_RS07710 WP_001153640.1 1603178..1604410(-) (kpsS) [Escherichia coli strain B-ZidR]
ATGCAAGACAACGCACTAACCATTTTATTATCGGGTAAAAAATATCTGCTATTGCAGGGGCCAATGGGACCCTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGACCGTAACGCTGTGAATGTTGTCTTCAACGGCGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGTTGGCTGCGAGATCTCCACCGACAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGCCCGCAATTTATAACCGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGACCCGGATTTTTATCGTAAGTTGCCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCATTTTCCCCGTGGTATGAAGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAATGAGCTGGATCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCGCGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTGAGTAAGG
AATATGGCTTAGGTGAGCGAGTCATATACGTGCACGATCTCCCAATGCCGGAATTATTACGCCACGCAAAAGCGGTGGTG
ACAATTAACAGTACGGCGGGGATCTCTGCGCTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAAGGCTTGACGTATAAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGTGGGTATTTGTTGGTTAAGACGCAGGTTAATGGGGTTTATTATGGGGAGATGATTTTTAACAAGATAAAACTGGAT
AAATATTTTCAGAGCTTGTCGCGTCAAGTATGA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

3D structure

• AlphaFold DB: Q072Q7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.646	96.585	0.383