Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SA231_RS05390 Genome accession   NZ_AP024203
Coordinates   1114346..1115191 (+) Length   281 a.a.
NCBI ID   WP_001621659.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA23-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1109346..1120191
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA231_RS05375 (SA231_10480) - 1109614..1111455 (-) 1842 WP_000077313.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  SA231_RS05380 (SA231_10490) metC 1111424..1112584 (-) 1161 WP_000175862.1 cystathionine beta-lyase MetC -
  SA231_RS05385 (SA231_10500) - 1112581..1113684 (-) 1104 WP_000655695.1 PLP-dependent transferase -
  SA231_RS05390 (SA231_10510) spo0J 1114346..1115191 (+) 846 WP_001621659.1 ParB/RepB/Spo0J family partition protein Regulator
  SA231_RS05395 (SA231_10520) - 1115345..1116226 (+) 882 WP_000373079.1 mechanosensitive ion channel family protein -
  SA231_RS05400 (SA231_10530) - 1116256..1116459 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  SA231_RS05405 (SA231_10540) ychF 1116471..1117568 (+) 1098 WP_001218729.1 redox-regulated ATPase YchF -
  SA231_RS05410 (SA231_10550) - 1117654..1117845 (-) 192 WP_001052483.1 hypothetical protein -
  SA231_RS05415 (SA231_10560) rpsF 1118089..1118385 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  SA231_RS05420 (SA231_10570) ssbA 1118406..1118909 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  SA231_RS05425 (SA231_10580) rpsR 1118961..1119203 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32797.82 Da        Isoelectric Point: 10.0000

>NTDB_id=71815 SA231_RS05390 WP_001621659.1 1114346..1115191(+) (spo0J) [Staphylococcus aureus strain SA23-1]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=71815 SA231_RS05390 WP_001621659.1 1114346..1115191(+) (spo0J) [Staphylococcus aureus strain SA23-1]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCGCAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381

Multiple sequence alignment