Detailed information NTG0071810

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: EL277_RS09780
• Genome accession: NZ_AP018936
• Coordinates: 1841844..1842239 (-)
• Length: 131 a.a.
• NCBI ID: WP_000282442.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain NU83127
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1836844..1847239

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL277_RS09755 (SPNU_1844)	-	1837107..1837640 (+)	534	WP_000775321.1	DUF402 domain-containing protein	-
EL277_RS09760 (SPNU_1845)	-	1837994..1838200 (-)	207	WP_000768520.1	transcriptional regulator	-
EL277_RS09765	-	1838361..1839667 (+)	1307	Protein_1818	transposase	-
EL277_RS09770 (SPNU_1848)	groL	1839766..1841388 (-)	1623	WP_000031573.1	chaperonin GroEL	-
EL277_RS09775 (SPNU_1849)	groES	1841404..1841688 (-)	285	WP_000917330.1	co-chaperone GroES	-
EL277_RS09780 (SPNU_1850)	ssbB/cilA	1841844..1842239 (-)	396	WP_000282442.1	single-stranded DNA-binding protein	Machinery gene
EL277_RS09785 (SPNU_1851)	-	1842317..1843078 (-)	762	WP_001107746.1	SDR family NAD(P)-dependent oxidoreductase	-
EL277_RS09790 (SPNU_1852)	ytpR	1843120..1843746 (-)	627	WP_000578285.1	YtpR family tRNA-binding protein	-
EL277_RS09795 (SPNU_1853)	-	1843762..1844079 (-)	318	WP_000615765.1	thioredoxin family protein	-
EL277_RS09800 (SPNU_1854)	-	1844076..1844375 (-)	300	WP_001013974.1	DUF4651 domain-containing protein	-
EL277_RS12625	-	1844469..1844600 (+)	132	WP_001811306.1	hypothetical protein	-
EL277_RS12425	-	1844625..1844687 (-)	63	WP_219335539.1	hypothetical protein	-
EL277_RS09805	-	1844712..1844903 (-)	192	WP_000291826.1	cell wall-binding protein	-
EL277_RS09810 (SPNU_1855)	-	1845064..1845738 (-)	675	WP_000725749.1	LiaF transmembrane domain-containing protein	-
EL277_RS09815 (SPNU_1856)	-	1845744..1846190 (-)	447	WP_000776589.1	LytTR family DNA-binding domain-containing protein	-
EL277_RS09820 (SPNU_1857)	-	1846304..1846807 (-)	504	WP_000800931.1	phosphatase PAP2 family protein	-
EL277_RS09825 (SPNU_1858)	-	1846804..1847166 (-)	363	WP_000078805.1	DUF2200 domain-containing protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14907.85 Da
• Isoelectric Point: 5.9409

>NTDB_id=71810 EL277_RS09780 WP_000282442.1 1841844..1842239(-) (ssbB/cilA) [Streptococcus pneumoniae strain NU83127]
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=71810 EL277_RS09780 WP_000282442.1 1841844..1842239(-) (ssbB/cilA) [Streptococcus pneumoniae strain NU83127]
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTCACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae TIGR4	100	100	1
ssbB/cilA	Streptococcus pneumoniae Rx1	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae D39	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae R6	99.237	100	0.992
ssbB/cilA	Streptococcus mitis SK321	99.237	100	0.992
ssbB/cilA	Streptococcus mitis NCTC 12261	97.71	100	0.977
ssbA	Streptococcus mutans UA159	75.573	100	0.756
ssbB	Streptococcus sobrinus strain NIDR 6715-7	70.992	100	0.71
ssbB	Lactococcus lactis subsp. cremoris KW2	60.714	85.496	0.519
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.887	80.916	0.42
ssb	Latilactobacillus sakei subsp. sakei 23K	47.788	86.26	0.412
ssbB	Bacillus subtilis subsp. subtilis str. 168	44.444	82.443	0.366