Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   IL310_RS12785 Genome accession   NZ_CP117409
Coordinates   2125698..2126480 (-) Length   260 a.a.
NCBI ID   WP_010905316.1    Uniprot ID   Q9CIG2
Organism   Lactococcus lactis strain LB7     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2120698..2131480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IL310_RS12755 (IL310_12760) - 2121003..2121992 (-) 990 WP_201248532.1 mevalonate kinase -
  IL310_RS12760 (IL310_12765) mvaD 2121979..2122935 (-) 957 WP_129881417.1 diphosphomevalonate decarboxylase -
  IL310_RS12765 (IL310_12770) mvk 2123241..2124173 (+) 933 WP_003131564.1 mevalonate kinase -
  IL310_RS12770 (IL310_12775) - 2124236..2124427 (+) 192 WP_003131566.1 hypothetical protein -
  IL310_RS12775 (IL310_12780) rsmI 2124504..2125379 (-) 876 WP_058204088.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  IL310_RS12780 (IL310_12785) yabA 2125379..2125705 (-) 327 WP_011675472.1 DNA replication initiation control protein YabA -
  IL310_RS12785 (IL310_12790) yaaT 2125698..2126480 (-) 783 WP_010905316.1 stage 0 sporulation family protein Regulator
  IL310_RS12790 (IL310_12795) - 2126532..2127392 (-) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  IL310_RS12795 (IL310_12800) tmk 2127525..2128160 (-) 636 WP_012897230.1 dTMP kinase -
  IL310_RS12800 (IL310_12805) yycF 2128338..2129039 (+) 702 WP_003131580.1 response regulator YycF -
  IL310_RS12805 (IL310_12810) vicK 2129032..2130474 (+) 1443 WP_201248531.1 cell wall metabolism sensor histidine kinase WalK Regulator
  IL310_RS12810 (IL310_12815) vicX 2130646..2131458 (+) 813 WP_201248530.1 MBL fold metallo-hydrolase Regulator

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29803.27 Da        Isoelectric Point: 6.0566

>NTDB_id=718055 IL310_RS12785 WP_010905316.1 2125698..2126480(-) (yaaT) [Lactococcus lactis strain LB7]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=718055 IL310_RS12785 WP_010905316.1 2125698..2126480(-) (yaaT) [Lactococcus lactis strain LB7]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.119

84.231

0.388