Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   NUW85_RS09825 Genome accession   NZ_CP102603
Coordinates   2077618..2077782 (-) Length   54 a.a.
NCBI ID   WP_269465305.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain MBLB0692     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2072618..2082782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NUW85_RS09825 (NUW85_09830) comS 2077618..2077782 (-) 165 WP_269465305.1 competence protein ComS Regulator
  NUW85_RS09830 (NUW85_09835) srfAB 2077847..2080891 (-) 3045 Protein_1929 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6264.26 Da        Isoelectric Point: 11.7559

>NTDB_id=718043 NUW85_RS09825 WP_269465305.1 2077618..2077782(-) (comS) [Bacillus amyloliquefaciens strain MBLB0692]
MRPRRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=718043 NUW85_RS09825 WP_269465305.1 2077618..2077782(-) (comS) [Bacillus amyloliquefaciens strain MBLB0692]
ATGAGACCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5