Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NUW85_RS09645 Genome accession   NZ_CP102603
Coordinates   2032657..2033610 (-) Length   317 a.a.
NCBI ID   WP_003156332.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain MBLB0692     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2027657..2038610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NUW85_RS09625 (NUW85_09625) - 2028536..2029960 (+) 1425 WP_069448546.1 MDR family MFS transporter -
  NUW85_RS09630 (NUW85_09630) - 2030002..2030946 (-) 945 WP_095315719.1 siderophore ABC transporter substrate-binding protein -
  NUW85_RS09635 (NUW85_09635) - 2030968..2031726 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  NUW85_RS09640 (NUW85_09640) - 2031720..2032667 (-) 948 WP_003156331.1 iron chelate uptake ABC transporter family permease subunit -
  NUW85_RS09645 (NUW85_09645) ceuB 2032657..2033610 (-) 954 WP_003156332.1 ABC transporter permease Machinery gene
  NUW85_RS09650 (NUW85_09650) - 2034025..2035389 (+) 1365 WP_014304341.1 aspartate kinase -
  NUW85_RS09655 (NUW85_09655) - 2035484..2035579 (+) 96 WP_012116800.1 YjcZ family sporulation protein -
  NUW85_RS09660 (NUW85_09660) phrC 2035730..2035849 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  NUW85_RS09665 (NUW85_09665) rapC 2035833..2036981 (-) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  NUW85_RS09670 (NUW85_09670) - 2037134..2038567 (-) 1434 WP_161620115.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=718040 NUW85_RS09645 WP_003156332.1 2032657..2033610(-) (ceuB) [Bacillus amyloliquefaciens strain MBLB0692]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFIFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=718040 NUW85_RS09645 WP_003156332.1 2032657..2033610(-) (ceuB) [Bacillus amyloliquefaciens strain MBLB0692]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGCCCGCTTGTGAAAATGTC
TATCGCTTTTATTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTCGTTAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
AGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533